Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq3 201 2e-49
seq1 178 2e-42
seq10 147 3e-33
seq7 96.9 5e-18
seq8 89.7 8e-16
seq6 84.2 3e-14
>seq3
Length=52284309
Score = 201 bits (222), Expect = 2e-49
Identities = 167/204 (82%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131
|||| | |||||| |||||||||| ||| |||||||||||||||| || ||| ||
Sbjct 23298994 GGCACGATAACTGGCACACCAGAGGTGCATCCTTCCCGGTCCTCTCGTAGTAGGGAAAGG 23298935
Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191
| || |||| || |||||||| |||||| ||||||||||||||| ||| |||||||
Sbjct 23298934 TACTTTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGATGTTCTGA 23298875
Query 192 ACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCC 251
||||||||| | | || |||||||||||||||| |||||||||||| || |||| |||||
Sbjct 23298874 ACCCAGCTCACATACCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCC 23298815
Query 252 CCAGGATGAGACGAGCCGACATCG 275
||||| | || ||||||||||||
Sbjct 23298814 CCAGGTGGTGAAGAGCCGACATCG 23298791
>seq1
Length=52205531
Score = 178 bits (196), Expect = 2e-42
Identities = 175/225 (78%), Gaps = 1/225 (0%)
Strand=Plus/Minus
Query 27 TTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGG-CAGTACAACTGG 85
|||||| |||||| ||| |||||||| |||||| | | ||| || | ||||||
Sbjct 3647170 TTCAGCAGTTATCCGCTCCGCACTTAGCTACCCAGCATTTACCGTGGACACGATAACTGG 3647111
Query 86 TGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTC 145
||||| || | |||| ||||||||||||||||||| ||| || ||||||||| ||
Sbjct 3647110 CACACCAAAGATGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTC 3647051
Query 146 CTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTG 205
|| || || || ||| |||||||||| |||| |||||||| |||||||||| |||
Sbjct 3647050 TAACACCTACACCGAATATGGACCGAACTATCTCATGACGTTCTAAACCCAGCTCACGTA 3646991
Query 206 CCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGC 250
|| |||||||||| |||||||||||||||||| || | ||| |||
Sbjct 3646990 CCGCTTTAATGGGTGAACAGCCCAACCCTTGGAACATGCTTAAGC 3646946
>seq10
Length=43275151
Score = 147 bits (162), Expect = 3e-33
Identities = 126/156 (81%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 88 CACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT 147
||||||| || |||| || || | ||||| ||||||| | || ||||||||| ||
Sbjct 5713116 CACCAGATGTGCGTCCTTCTCGATTCTCTCATACTAAGAAAAGGTCCTCTCAATATTTTA 5713175
Query 148 ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCC 207
|| ||||| |||||| ||||||||||||||| ||| ||||| |||||| ||| ||| ||
Sbjct 5713176 ACACCCACACCGGATATGGACCGAACTGTCTCACGATGTTCTAAACCCAACTCACGTACC 5713235
Query 208 TCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTA 243
||||||||||| || |||||||||||||| |||||
Sbjct 5713236 ACTTTAATGGGCAAATAGCCCAACCCTTGGAACCTA 5713271
>seq7
Length=51758522
Score = 96.9 bits (106), Expect = 5e-18
Identities = 76/91 (84%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 185 GTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTAC 244
||||| |||||| || ||| || ||| ||| |||||||| || |||||||||||||| |
Sbjct 7596489 GTTCTAAACCCAACTTACGTACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTC 7596430
Query 245 TTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|||| |||||||||| || ||| ||||||||
Sbjct 7596429 TTCAACCCCAGGATGTGATGAGTCGACATCG 7596399
>seq8
Length=59662532
Score = 89.7 bits (98), Expect = 8e-16
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 194 CCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCC 253
||||||| ||| |||||||||||||||| |||||||||||| || |||| |||||||
Sbjct 36083910 CCAGCTCACGTATTGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCCCC 36083969
Query 254 AGGATGAGACGAGCCGACATCG 275
||| | || ||||||||||||
Sbjct 36083970 AGGTGGCGAAGAGCCGACATCG 36083991
>seq6
Length=31977256
Score = 84.2 bits (92), Expect = 3e-14
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 105 TCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAG 164
||||||||||||||||||| ||| || ||||||||| || |||||||| ||||||
Sbjct 19664566 TCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATAT 19664507
Query 165 GGACCGAACTGTCT 178
||||||||||||||
Sbjct 19664506 GGACCGAACTGTCT 19664493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780794644688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |