Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq3 201 2e-49 seq1 178 2e-42 seq10 147 3e-33 seq7 96.9 5e-18 seq8 89.7 8e-16 seq6 84.2 3e-14 >seq3 Length=52284309 Score = 201 bits (222), Expect = 2e-49 Identities = 167/204 (82%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131 |||| | |||||| |||||||||| ||| |||||||||||||||| || ||| || Sbjct 23298994 GGCACGATAACTGGCACACCAGAGGTGCATCCTTCCCGGTCCTCTCGTAGTAGGGAAAGG 23298935 Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191 | || |||| || |||||||| |||||| ||||||||||||||| ||| ||||||| Sbjct 23298934 TACTTTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGATGTTCTGA 23298875 Query 192 ACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCC 251 ||||||||| | | || |||||||||||||||| |||||||||||| || |||| ||||| Sbjct 23298874 ACCCAGCTCACATACCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCC 23298815 Query 252 CCAGGATGAGACGAGCCGACATCG 275 ||||| | || |||||||||||| Sbjct 23298814 CCAGGTGGTGAAGAGCCGACATCG 23298791 >seq1 Length=52205531 Score = 178 bits (196), Expect = 2e-42 Identities = 175/225 (78%), Gaps = 1/225 (0%) Strand=Plus/Minus Query 27 TTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGG-CAGTACAACTGG 85 |||||| |||||| ||| |||||||| |||||| | | ||| || | |||||| Sbjct 3647170 TTCAGCAGTTATCCGCTCCGCACTTAGCTACCCAGCATTTACCGTGGACACGATAACTGG 3647111 Query 86 TGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTC 145 ||||| || | |||| ||||||||||||||||||| ||| || ||||||||| || Sbjct 3647110 CACACCAAAGATGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTC 3647051 Query 146 CTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTG 205 || || || || ||| |||||||||| |||| |||||||| |||||||||| ||| Sbjct 3647050 TAACACCTACACCGAATATGGACCGAACTATCTCATGACGTTCTAAACCCAGCTCACGTA 3646991 Query 206 CCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGC 250 || |||||||||| |||||||||||||||||| || | ||| ||| Sbjct 3646990 CCGCTTTAATGGGTGAACAGCCCAACCCTTGGAACATGCTTAAGC 3646946 >seq10 Length=43275151 Score = 147 bits (162), Expect = 3e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 88 CACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT 147 ||||||| || |||| || || | ||||| ||||||| | || ||||||||| || Sbjct 5713116 CACCAGATGTGCGTCCTTCTCGATTCTCTCATACTAAGAAAAGGTCCTCTCAATATTTTA 5713175 Query 148 ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCC 207 || ||||| |||||| ||||||||||||||| ||| ||||| |||||| ||| ||| || Sbjct 5713176 ACACCCACACCGGATATGGACCGAACTGTCTCACGATGTTCTAAACCCAACTCACGTACC 5713235 Query 208 TCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTA 243 ||||||||||| || |||||||||||||| ||||| Sbjct 5713236 ACTTTAATGGGCAAATAGCCCAACCCTTGGAACCTA 5713271 >seq7 Length=51758522 Score = 96.9 bits (106), Expect = 5e-18 Identities = 76/91 (84%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 185 GTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTAC 244 ||||| |||||| || ||| || ||| ||| |||||||| || |||||||||||||| | Sbjct 7596489 GTTCTAAACCCAACTTACGTACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTC 7596430 Query 245 TTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||| |||||||||| || ||| |||||||| Sbjct 7596429 TTCAACCCCAGGATGTGATGAGTCGACATCG 7596399 >seq8 Length=59662532 Score = 89.7 bits (98), Expect = 8e-16 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 194 CCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCC 253 ||||||| ||| |||||||||||||||| |||||||||||| || |||| ||||||| Sbjct 36083910 CCAGCTCACGTATTGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCCCC 36083969 Query 254 AGGATGAGACGAGCCGACATCG 275 ||| | || |||||||||||| Sbjct 36083970 AGGTGGCGAAGAGCCGACATCG 36083991 >seq6 Length=31977256 Score = 84.2 bits (92), Expect = 3e-14 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 105 TCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAG 164 ||||||||||||||||||| ||| || ||||||||| || |||||||| |||||| Sbjct 19664566 TCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATAT 19664507 Query 165 GGACCGAACTGTCT 178 |||||||||||||| Sbjct 19664506 GGACCGAACTGTCT 19664493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780794644688