Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq6 190 5e-46 seq10 125 2e-26 seq8 123 6e-26 seq2 87.8 4e-15 seq3 86.0 2e-14 >seq6 Length=31977256 Score = 190 bits (210), Expect = 5e-46 Identities = 154/185 (83%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70 || || ||||||||| | | |||||||||| ||| |||||||| ||||||||| | || Sbjct 16514242 ACTCGTAGGCCTTCTACCTTCACGCGGCATTGCTCTGTCAGGCTTTCGCCCATTGCGGAA 16514301 Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130 ||| |||||||||||||||||| ||||||||| ||||||||||| |||||||||||| Sbjct 16514302 AATTTCCCACTGCTGCCTCCCGT-GGAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCTGA 16514360 Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC 190 |||||||||| ||||||||| |||| |||||| ||| | ||| || | ||||||||| Sbjct 16514361 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGTTATTGCCTCACCAACTAGC 16514420 Query 191 TAATC 195 ||||| Sbjct 16514421 TAATC 16514425 >seq10 Length=43275151 Score = 125 bits (138), Expect = 2e-26 Identities = 104/127 (82%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 66 TGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTG 125 || || |||| |||||| ||||| || ||||||||||| |||||||||||| |||||||| Sbjct 39025749 TGAAAAATTCTCCACTGTTGCCTTCCCTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTG 39025808 Query 126 GCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAA 185 |||| |||||||||| |||| |||| |||| | | || ||| || ||| || | |||| Sbjct 39025809 GCTGATCATCCTCTCGGACCTGCTATTGATCATTGTCTTGGTAAGCTATTGCCTCACCAA 39025868 Query 186 CTAGCTA 192 ||||||| Sbjct 39025869 CTAGCTA 39025875 Score = 75.2 bits (82), Expect = 3e-11 Identities = 67/83 (81%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 |||||||| | | | | ||||||||| |||||| || |||| ||| ||||| ||||| Sbjct 29982655 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCC 29982714 Query 62 ATTGTGCAATATTCCCCACTGCT 84 ||||| ||| ||||||||||||| Sbjct 29982715 ATTGTCCAAGATTCCCCACTGCT 29982737 >seq8 Length=59662532 Score = 123 bits (136), Expect = 6e-26 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 60 CCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 119 || ||| | || |||| ||| ||||| | ||||||||||||||| | |||| ||||| || Sbjct 2881164 CCTTTGCGGAAAATTCTCCATTGCTGTCACCCGTAGGAGTCTGGCCTGTGTTTCAGTCCC 2881223 Query 120 AGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCC 179 |||||| ||| |||||||| | ||||||||| |||| |||||| ||| | ||| || Sbjct 2881224 AGTGTGACTGATCATCCTCACGGACCAGCTATTGATCATCGCCTTGGTAAGTTATTGCCT 2881283 Query 180 CGCCAACTAGCTAATC 195 | |||||||||||||| Sbjct 2881284 CACCAACTAGCTAATC 2881299 >seq2 Length=49040938 Score = 87.8 bits (96), Expect = 4e-15 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70 ||||| ||||||||| | | |||||| ||| ||| | |||||||| ||||||||| | || Sbjct 15302246 ACCCGTAGGCCTTCTACCTTCACGCGACATTGCTCCGTCAGGCTTTCGCCCATTGCGGAA 15302187 Query 71 TATTCCCCACTGCTGCCT 88 ||||||||||||||||| Sbjct 15302186 AATTCCCCACTGCTGCCT 15302169 Score = 82.4 bits (90), Expect = 2e-13 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 111 CTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGG 170 || ||| |||| |||| || |||||||||| ||||||||| |||| |||||| ||| | Sbjct 2980063 CTTAGTCCCAGCGTGGTTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAG 2980122 Query 171 CCATTACCCCGCCAACTAGCTAATC 195 | ||| || | |||||||||||||| Sbjct 2980123 CTATTGCCTCACCAACTAGCTAATC 2980147 >seq3 Length=52284309 Score = 86.0 bits (94), Expect = 2e-14 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70 |||| ||||||||| | | |||||||||| ||| | |||||||| ||||||||| || Sbjct 28368451 ACCCATAGGCCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCAAAA 28368392 Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTG 102 |||| ||| || |||||| ||||||||||| Sbjct 28368391 AATTCTCCATTGTTGCCTCTTGTAGGAGTCTG 28368360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222391345408