Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq6 196 1e-47 seq2 165 2e-38 seq10 134 4e-29 seq8 134 4e-29 seq1 105 2e-20 >seq6 Length=31977256 Score = 196 bits (216), Expect = 1e-47 Identities = 160/193 (83%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || ||||||||||||| |||||||||| | Sbjct 16514432 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAACTTACCAAGGCGATGATCAGTAGCTGGT 16514373 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| ||||||||||| ||| ||||| ||||||||||| Sbjct 16514372 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGACCCAGACTCC-ACGGGAGGCAG 16514314 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||| ||| || | |||||||| ||||||||| ||||| ||||||||| | || Sbjct 16514313 CAGTGGGAAATTTTCCGCAATGGGCGAAAGCCTGACAGAGCAATGCCGCGTGAAGGTAGA 16514254 Query 340 AGGCCTTCGGGTC 352 |||||| || ||| Sbjct 16514253 AGGCCTACGAGTC 16514241 >seq2 Length=49040938 Score = 165 bits (182), Expect = 2e-38 Identities = 167/215 (78%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 274 AGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAG 333 ||||||||||||||||| || | |||||||| ||||||||| | ||||| | ||||||| Sbjct 15302169 AGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGTCGCGTGAA 15302228 Query 334 CGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTG 391 | |||||||| |||||| | || ||| | | | ||||| |||||||||| | Sbjct 15302229 GGTAGAAGGCCTACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCCG 15302288 Query 392 AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGT 451 ||| |||| ||||||||| ||||||||||||||||||| || ||| || ||||| Sbjct 15302289 GGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGT 15302348 Query 452 TATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGG 486 |||||||||| | | |||||||||| || ||||| Sbjct 15302349 TATCCGGAATGA-TTGGGCGTAAAGCGTCTGTAGG 15302382 Score = 93.3 bits (102), Expect = 1e-16 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 ||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | | Sbjct 2980153 GCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTC 2980094 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAG 251 |||||| ||||| |||| ||| ||| || Sbjct 2980093 CGAGAGGATGATCAACCACGCTGGGACTAAG 2980063 >seq10 Length=43275151 Score = 134 bits (148), Expect = 4e-29 Identities = 125/157 (80%), Gaps = 4/157 (3%) Strand=Plus/Minus Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||||||||| ||| ||||||||| |||||| ||| |||||| |||||||| || Sbjct 29982737 AGCAGTGGGGAATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAA 29982678 Query 338 GAAGGCC--TTCGGGTCGTAAAGCTCTGTCCTCAA--GGAAGATAATGACGGTACTTGAG 393 ||||| | | | | | |||||||||| || || | | ||| ||||| | ||| ||| Sbjct 29982677 GAAGGGCAATGCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGGACTCGAG 29982618 Query 394 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGG 430 || |||||||||| ||||| ||||||||||||||||| Sbjct 29982617 GAAGAAGCCCCGGTTAACTCCGTGCCAGCAGCCGCGG 29982581 Score = 122 bits (134), Expect = 3e-25 Identities = 103/127 (81%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 170 TAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGT 229 |||||||||||| ||| || |||||||||| | | ||||| |||| | | |||||| | Sbjct 39025875 TAGCTAGTTGGTGAGGCAATAGCTTACCAAGACAATGATCAATAGCAGGTCCGAGAGGAT 39025816 Query 230 GATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAA 289 |||| |||||| ||| |||||||||||| ||| ||||||| || ||||| |||||| ||| Sbjct 39025815 GATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTAGGGAAGGCAACAGTGGAGAA 39025756 Query 290 TATTGCA 296 | || || Sbjct 39025755 TTTTTCA 39025749 >seq8 Length=59662532 Score = 134 bits (148), Expect = 4e-29 Identities = 139/181 (77%), Gaps = 1/181 (1%) Strand=Plus/Minus Query 150 AGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATC 209 |||| ||| | |||||||||||||||||||| ||| || ||||||||||||| |||| Sbjct 2881316 AGGAGGGACTCACGTCTGATTAGCTAGTTGGTGAGGCAATAACTTACCAAGGCGATGATC 2881257 Query 210 AGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTA 269 | |||| | | | |||| ||||| | |||| ||| ||||| |||| | ||| ||||||| Sbjct 2881256 AATAGCTGGTCCGTGAGGATGATCAGTCACACTGGGACTGAAACACAGGCCAGACTCCTA 2881197 Query 270 CGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCG 329 |||| | ||||| ||| |||| || | ||| || |||| ||| | | | ||| ||||| Sbjct 2881196 CGGGTGACAGCAATGGAGAATTTTCCGCAAAGGAGAAAAACCT-ACGGAACAATACCGCG 2881138 Query 330 T 330 | Sbjct 2881137 T 2881137 >seq1 Length=52205531 Score = 105 bits (116), Expect = 2e-20 Identities = 119/157 (76%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 321 AACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGAT--A 378 || ||||||||| | |||||||| |||||| | || ||| | | | ||||| | Sbjct 34092207 AATGCCGCGTGAAGGTAGAAGGCCTACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCA 34092266 Query 379 ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 438 ||||||||| | ||| |||| ||||||||| ||||||||||||||||||| || Sbjct 34092267 ATGACGGTATCCGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAG 34092326 Query 439 AGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAA 475 ||| || ||||||||||||||| | | ||||||||| Sbjct 34092327 AGGATGCAAGCGTTATCCGGAATGA-TTGGGCGTAAA 34092362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497589396992