Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq6 196 1e-47
seq2 165 2e-38
seq10 134 4e-29
seq8 134 4e-29
seq1 105 2e-20
>seq6
Length=31977256
Score = 196 bits (216), Expect = 1e-47
Identities = 160/193 (83%), Gaps = 1/193 (1%)
Strand=Plus/Minus
Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219
|||||||||||||||||||||| ||| || ||||||||||||| |||||||||| |
Sbjct 16514432 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAACTTACCAAGGCGATGATCAGTAGCTGGT 16514373
Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279
| |||||| ||||| |||||| ||| ||||||||||| ||| ||||| |||||||||||
Sbjct 16514372 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGACCCAGACTCC-ACGGGAGGCAG 16514314
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
||||||| ||| || | |||||||| ||||||||| ||||| ||||||||| | ||
Sbjct 16514313 CAGTGGGAAATTTTCCGCAATGGGCGAAAGCCTGACAGAGCAATGCCGCGTGAAGGTAGA 16514254
Query 340 AGGCCTTCGGGTC 352
|||||| || |||
Sbjct 16514253 AGGCCTACGAGTC 16514241
>seq2
Length=49040938
Score = 165 bits (182), Expect = 2e-38
Identities = 167/215 (78%), Gaps = 3/215 (1%)
Strand=Plus/Plus
Query 274 AGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAG 333
||||||||||||||||| || | |||||||| ||||||||| | ||||| | |||||||
Sbjct 15302169 AGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGTCGCGTGAA 15302228
Query 334 CGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTG 391
| |||||||| |||||| | || ||| | | | ||||| |||||||||| |
Sbjct 15302229 GGTAGAAGGCCTACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCCG 15302288
Query 392 AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGT 451
||| |||| ||||||||| ||||||||||||||||||| || ||| || |||||
Sbjct 15302289 GGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGT 15302348
Query 452 TATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGG 486
|||||||||| | | |||||||||| || |||||
Sbjct 15302349 TATCCGGAATGA-TTGGGCGTAAAGCGTCTGTAGG 15302382
Score = 93.3 bits (102), Expect = 1e-16
Identities = 75/91 (82%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220
||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | |
Sbjct 2980153 GCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTC 2980094
Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAG 251
|||||| ||||| |||| ||| ||| ||
Sbjct 2980093 CGAGAGGATGATCAACCACGCTGGGACTAAG 2980063
>seq10
Length=43275151
Score = 134 bits (148), Expect = 4e-29
Identities = 125/157 (80%), Gaps = 4/157 (3%)
Strand=Plus/Minus
Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337
||||||||||||| ||| ||||||||| |||||| ||| |||||| |||||||| ||
Sbjct 29982737 AGCAGTGGGGAATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAA 29982678
Query 338 GAAGGCC--TTCGGGTCGTAAAGCTCTGTCCTCAA--GGAAGATAATGACGGTACTTGAG 393
||||| | | | | | |||||||||| || || | | ||| ||||| | ||| |||
Sbjct 29982677 GAAGGGCAATGCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGGACTCGAG 29982618
Query 394 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGG 430
|| |||||||||| ||||| |||||||||||||||||
Sbjct 29982617 GAAGAAGCCCCGGTTAACTCCGTGCCAGCAGCCGCGG 29982581
Score = 122 bits (134), Expect = 3e-25
Identities = 103/127 (81%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 170 TAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGT 229
|||||||||||| ||| || |||||||||| | | ||||| |||| | | |||||| |
Sbjct 39025875 TAGCTAGTTGGTGAGGCAATAGCTTACCAAGACAATGATCAATAGCAGGTCCGAGAGGAT 39025816
Query 230 GATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAA 289
|||| |||||| ||| |||||||||||| ||| ||||||| || ||||| |||||| |||
Sbjct 39025815 GATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTAGGGAAGGCAACAGTGGAGAA 39025756
Query 290 TATTGCA 296
| || ||
Sbjct 39025755 TTTTTCA 39025749
>seq8
Length=59662532
Score = 134 bits (148), Expect = 4e-29
Identities = 139/181 (77%), Gaps = 1/181 (1%)
Strand=Plus/Minus
Query 150 AGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATC 209
|||| ||| | |||||||||||||||||||| ||| || ||||||||||||| ||||
Sbjct 2881316 AGGAGGGACTCACGTCTGATTAGCTAGTTGGTGAGGCAATAACTTACCAAGGCGATGATC 2881257
Query 210 AGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTA 269
| |||| | | | |||| ||||| | |||| ||| ||||| |||| | ||| |||||||
Sbjct 2881256 AATAGCTGGTCCGTGAGGATGATCAGTCACACTGGGACTGAAACACAGGCCAGACTCCTA 2881197
Query 270 CGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCG 329
|||| | ||||| ||| |||| || | ||| || |||| ||| | | | ||| |||||
Sbjct 2881196 CGGGTGACAGCAATGGAGAATTTTCCGCAAAGGAGAAAAACCT-ACGGAACAATACCGCG 2881138
Query 330 T 330
|
Sbjct 2881137 T 2881137
>seq1
Length=52205531
Score = 105 bits (116), Expect = 2e-20
Identities = 119/157 (76%), Gaps = 3/157 (2%)
Strand=Plus/Plus
Query 321 AACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGAT--A 378
|| ||||||||| | |||||||| |||||| | || ||| | | | ||||| |
Sbjct 34092207 AATGCCGCGTGAAGGTAGAAGGCCTACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCA 34092266
Query 379 ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 438
||||||||| | ||| |||| ||||||||| ||||||||||||||||||| ||
Sbjct 34092267 ATGACGGTATCCGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAG 34092326
Query 439 AGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAA 475
||| || ||||||||||||||| | | |||||||||
Sbjct 34092327 AGGATGCAAGCGTTATCCGGAATGA-TTGGGCGTAAA 34092362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497589396992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |