Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 4e-16 seq8 89.7 1e-15 seq1 86.0 2e-14 >seq2 Length=49040938 Score = 91.5 bits (100), Expect = 4e-16 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 15302295 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 15302354 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGG 100 |||| | ||||||||||| || ||||| Sbjct 15302355 GAATGATTGGGCGTAAAGCGTCTGTAGG 15302382 >seq8 Length=59662532 Score = 89.7 bits (98), Expect = 1e-15 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 279 CGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 ||||||| |||||||| ||| ||||||||||||||||||||||| |||||||||||||| Sbjct 31025473 CGAAAGCATGGGGAGCGAACGGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGA 31025531 >seq1 Length=52205531 Score = 86.0 bits (94), Expect = 2e-14 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 34092286 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 34092345 Query 73 GAATTACTGGGCGTAAA 89 |||| | |||||||||| Sbjct 34092346 GAATGATTGGGCGTAAA 34092362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203191481344