Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq11 309 6e-82 seq1 273 4e-71 seq5 219 8e-55 seq2 194 3e-47 seq7 113 9e-23 seq10 86.0 1e-14 >seq11 Length=50367376 Score = 309 bits (342), Expect = 6e-82 Identities = 229/264 (87%), Gaps = 4/264 (2%) Strand=Plus/Minus Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | ||| | ||| | |||||||||||||||||||||| Sbjct 21185841 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCC-ACGGAAGTTTGAGGCAATAACAGG 21185783 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 21185782 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGT 21185723 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| Sbjct 21185722 CTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TCAAATTTCATCGTGATGGGGATAGA 21185664 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||| Sbjct 21185663 TCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCG 21185604 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||| Sbjct 21185603 TTGACTACGTCCCTGCCCTTTGTA 21185580 Score = 309 bits (342), Expect = 6e-82 Identities = 229/264 (87%), Gaps = 4/264 (2%) Strand=Plus/Minus Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | ||| | ||| | |||||||||||||||||||||| Sbjct 21272307 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCC-ACGGAAGTTTGAGGCAATAACAGG 21272249 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 21272248 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGT 21272189 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| Sbjct 21272188 CTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TCAAATTTCATCGTGATGGGGATAGA 21272130 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||| Sbjct 21272129 TCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCG 21272070 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||| Sbjct 21272069 TTGACTACGTCCCTGCCCTTTGTA 21272046 Score = 293 bits (324), Expect = 4e-77 Identities = 227/264 (86%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | ||| | ||| | |||||||||||||| ||||||| Sbjct 21278926 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCC-ACGGAAGTTTGAGGCA-TAACAGG 21278869 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||||||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct 21278868 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCA-CGAGT 21278810 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| Sbjct 21278809 CTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGA 21278751 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||| Sbjct 21278750 TCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCG 21278691 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||| Sbjct 21278690 TTGACTACGTCCCTGCCCTTTGTA 21278667 Score = 183 bits (202), Expect = 6e-44 Identities = 205/270 (76%), Gaps = 18/270 (7%) Strand=Plus/Minus Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | ||| | ||| | |||||||||||||||||||||| Sbjct 21201121 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCC-ACGGAAGTTTGAGGCAATAACAGG 21201063 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||||||||| || ||||||||||||||||||||||||| | |||||||| Sbjct 21201062 TCTGTGATGCCCTT-GAACACCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGT 21201004 Query 185 ------TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGG 238 | | ||||| | ||| | | ||||| |||| | Sbjct 21201003 CTATAGTGAACACCT---CAAGAACACATAGCCAATCTCAGCAAACAC-----AAAAACA 21200952 Query 239 GATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAG 298 || | |||||||||| ||| ||||||||||||||| ||||||||||||| |||||||| Sbjct 21200951 AATTGTTCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAG 21200892 Query 299 CACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | |||||||| ||||||||||||||||||| Sbjct 21200891 CTCGCGTTGACTACGTCCCTGCCCTTTGTA 21200862 >seq1 Length=52205531 Score = 273 bits (302), Expect = 4e-71 Identities = 220/263 (84%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 67 GCCGGCTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGT 125 ||| |||||||||||||||||| | | | || | | ||||||||||||||||||||||| Sbjct 12132405 GCCAGCTTCTTAGAGGGACTATGGCCACTTAGGCCACGGAAGTTTGAGGCAATAACAGGT 12132464 Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||||||||||||||||||||||||||||||| |||||| | ||| | |||||||| Sbjct 12132465 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGAGCGCTATAATGATCTATTCAACGAGTC 12132524 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 || ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| Sbjct 12132525 TATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGAT 12132583 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 || ||||||| ||| ||||||||||||||| ||||||||||||| ||||||| | ||||| Sbjct 12132584 CACTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCATCTCGCGT 12132643 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||| || |||||||||||| ||| Sbjct 12132644 TGACTATGTCCCTGCCCTTGGTA 12132666 >seq5 Length=40819286 Score = 219 bits (242), Expect = 8e-55 Identities = 179/214 (84%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 67 GCCGGCTTCTTAGAGGGACTAT--CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | ||| | ||| | ||| |||||||||||||| ||| Sbjct 12974657 GCCAGCTTCTTAGAGGGACTATGACCGCTTAGGCC-ACGGATGTTTGAGGCAATAATAGG 12974715 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 ||||||||||||||||||||||| |||| ||||||||||||||||| | |||||||| Sbjct 12974716 TCTGTGATGCCCTTAGATGTTCTTGGCCACACGCGCGCTACACTGATTTATTCAACGAGT 12974775 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 | || ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| Sbjct 12974776 TTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGA 12974834 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCC 278 |||||||||| ||| ||||||||||||||| || Sbjct 12974835 TCATTGCAATTGTTGGTCTTCAACGAGGAATTCC 12974868 >seq2 Length=49040938 Score = 194 bits (214), Expect = 3e-47 Identities = 151/179 (84%), Gaps = 1/179 (1%) Strand=Plus/Minus Query 100 GATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCG 159 || ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct 9191442 GACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTTTGGGCCACACGCG 9191383 Query 160 CGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGT 219 ||||||||||| | |||||||| || ||||||||| ||| | |||||||||| | Sbjct 9191382 CGCTACACTGATGTATTCAACGAGTCTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-T 9191324 Query 220 TAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 278 ||| | ||||| |||||||| | |||||||||| ||| ||||||||||||||| || Sbjct 9191323 GAAATTTCATCGTGATGGGGATAAATCATTGCAATTGTTGGTCTTCAACGAGGAATTCC 9191265 Score = 188 bits (208), Expect = 1e-45 Identities = 196/260 (75%), Gaps = 29/260 (11%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||||||||| | ||| ||||| | | |||||||||||||||||||||||| Sbjct 5468273 GCTTCTTAGAGGGACTATGGCCGCTTAAGCC-ACGAAAGTTTGAGGCAATAACAGGTCTG 5468331 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 ||| || | | |||||| | |||||||| || Sbjct 5468332 TGAGGCAATAA-------------------------CACTGATGTATTCAACGAGTCTAT 5468366 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 ||||||||| ||| |||||||||||| | ||| | ||||| |||||||||| ||| Sbjct 5468367 AGCCTTGGCCGACAGGCCTGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCAT 5468425 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| ||| ||||||||||||||| ||||||||||| | ||||| ||| |||||||| Sbjct 5468426 TGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATTAGCTCGCGTTGA 5468485 Query 309 TTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 5468486 CTACGTCCCTGCCCTTTGTA 5468505 >seq7 Length=51758522 Score = 113 bits (124), Expect = 9e-23 Identities = 186/263 (71%), Gaps = 19/263 (7%) Strand=Plus/Minus Query 73 TTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||| ||| ||| | || | |||||||||| || ||| |||| |||| Sbjct 18948024 TTCTTAGAGGGATTATACTCGCTTAGGCACA--GAAGTTTGAGACAGTAATAGGTATGTG 18947967 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||| | |||||||||||||| | ||||| | | | ||| | | || | | || | Sbjct 18947966 ATGTCTTTAGATGTTCTGGGTCACACGCACCTTGTATTGATGTATCTAATAAATCTATAA 18947907 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| | |||| |||||||||| | || | | | ||| |||||||| | ||||| Sbjct 18947906 TCTTGAC----AGGTTCGGGTAATCTT-TGAAGTTTTATTGTGATGGGGATAAATCATTG 18947852 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCA----CGCGTT 306 ||||| ||| | | ||||||| |||||||| | ||||||| || | |||| Sbjct 18947851 CAATTGTTGGT-----AGGAGGAATTCCTAGTAAATGTAAGTCATCAACAACCTCACGTT 18947797 Query 307 GATTACGTCCCTGC-CCTTTGTA 328 ||||| |||||||| | |||||| Sbjct 18947796 GATTATGTCCCTGCACGTTTGTA 18947774 >seq10 Length=43275151 Score = 86.0 bits (94), Expect = 1e-14 Identities = 63/71 (89%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | ||| | ||| | |||||||||||||||||||||| Sbjct 25056080 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCC-ACGGAAGTTTGAGGCAATAACAGG 25056022 Query 125 TCTGTGATGCC 135 ||||||||||| Sbjct 25056021 TCTGTGATGCC 25056011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947193293824