Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq2 129 2e-27 seq6 107 6e-21 seq10 104 8e-20 seq7 87.8 6e-15 >seq2 Length=49040938 Score = 129 bits (142), Expect = 2e-27 Identities = 140/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 36375305 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 36375364 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||| | ||| |||||||| ||| Sbjct 36375365 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAATCGACTGATGTTGAAGAATC 36375424 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 36375425 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 36375484 Query 182 CCGAAA 187 |||||| Sbjct 36375485 CCGAAA 36375490 >seq6 Length=31977256 Score = 107 bits (118), Expect = 6e-21 Identities = 303/457 (66%), Gaps = 30/457 (7%) Strand=Plus/Minus Query 100 AACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAA 159 |||| ||| |||||||| ||| || |||||| ||||| ||||||||||| || | | | Sbjct 26717580 AACCGACTGATGTTGAAGAATCAGCCGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGA 26717521 Query 160 ACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCC-TCAAGTATCACCAT 218 | || ||||||||||||||||||| || ||| || | | || ||| || Sbjct 26717520 ATCCAGAGCTAGCTGGTTCTCTCCGAAATGCGTTGAGGCGCAGCAGTTGACTA-CAC-AT 26717463 Query 219 CG-GGGGTAGAGCACTGTTATGGCTAGGGGGTC-ATTGCGACTTACCAAACCATTGCAAA 276 | |||||| ||||||||| || ||| | | ||| ||||||| | ||||| Sbjct 26717462 CTAGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGCGG--TACCAAATCGAGGCAAA 26717405 Query 277 CTCCGAATGCGC-----------------ATCAGTTTTACCGCGGG--AGTGAGGGCATG 317 ||| |||| | || || | | | || |||||| ||| Sbjct 26717404 CTCTGAATACTAGATATGACCTCAAAATAATAAGGGTCAAGGTCGGCCAGTGAGACGATG 26717345 Query 318 GGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAAT 377 || | |||| | | | ||||||| || | ||||| | |||||||||||| |||| Sbjct 26717344 GGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACTAGCTAAGGCCCCTAAAT 26717285 Query 378 GACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAA 437 ||| ||| ||| | | || || || | ||| ||||| | |||| ||| || | ||| Sbjct 26717284 GACCGCTCAGTGATA--AAGGAGGTAGGGGTGCAGAGACAACCAGGAGGTTTGCCTAGAA 26717227 Query 438 GCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAA 497 ||||||| | || ||||||||||||| |||||||| ||||| || ||| || | Sbjct 26717226 GCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGA 26717168 Query 498 TAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGAT 534 | | |||| |||| ||| ||||||| ||||||| Sbjct 26717167 TGAACGGG-GCTAAGCGATCTGCCGAAGCTGTGGGAT 26717132 >seq10 Length=43275151 Score = 104 bits (114), Expect = 8e-20 Identities = 159/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 336 CGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTA 395 ||||||| || |||||||| | ||||||||||||| ||||||| ||| ||| | | | Sbjct 17227633 CGAGAGGGAAACAATCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--A 17227690 Query 396 ACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAG 455 | || || | || ||||| | |||| ||| || | |||||||||| | || |||| Sbjct 17227691 ATGAGGTAGGGGTGTAGAGACAACCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAG 17227749 Query 456 AGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTG 515 ||||||||| |||||||| ||||| || ||| || || | |||| |||| Sbjct 17227750 AGTGCGTAATAGCTCACTGATCGAGTGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGA 17227808 Query 516 TCTACCGAAGCAGTGGGATCATTTATATGATCGGTAGGGGAGC 558 || ||||||| ||||||| || || ||||||||||| Sbjct 17227809 TCAGCCGAAGCTGTGGGATGTCAAATTGAATTGGTAGGGGAGC 17227851 Score = 84.2 bits (92), Expect = 7e-14 Identities = 125/175 (71%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 306 AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365 |||||| ||||| | |||| | | | ||||||| || || ||||| | |||||| Sbjct 5297934 AGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAACCCGGATCACCAGCTA 5297993 Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425 ||||||| |||||||| | ||| | | || || || | ||| |||||| | |||| Sbjct 5297994 AGGCCCCTAAATGACAAGTCAGTGATA--AAGGAGGTAGGGGTGCAAAGACAACCAGGAG 5298051 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 || | | |||||||||| | || |||||||| |||| |||||| | ||||| Sbjct 5298052 ATTTTCCTAGAAGCAGCCA-CCCTTAAAAGAGTGTGTAATAGCTCAATGATCGAG 5298105 >seq7 Length=51758522 Score = 87.8 bits (96), Expect = 6e-15 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 351 CCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGC 410 ||||| | ||| ||||||||| ||||||| ||| ||| | | || || || | ||| Sbjct 39730587 CCGGATCACCAGTTAAGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAAGGGTGC 39730644 Query 411 TAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTC 470 ||||| | |||| ||| || | |||| || || | || ||||||||||||| ||||| Sbjct 39730645 AGAGACAACCAGGAGGTTTGCCTAGAAGTAGTCACCC-TTGAAAGAGTGCGTAATAGCTC 39730703 Query 471 ACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTG 530 ||| ||||| | || || || || | |||| |||||| ||| |||||| ||| Sbjct 39730704 ACTGATCGAGCACTCTTACGCCGAAGATGAACGGG-ATTAAGCGATCTGTCGAAGCTGTG 39730762 Query 531 GGAT 534 |||| Sbjct 39730763 GGAT 39730766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689588037632