Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 1e-16 seq10 89.7 2e-15 seq8 87.8 6e-15 >seq2 Length=49040938 Score = 93.3 bits (102), Expect = 1e-16 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 388 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGG 447 |||||| | |||||||||||||||||||| |||||||| ||||| ||||||||||||| | Sbjct 33415906 GTTACGTCTTTCGTGCAGGTCGGAACTTATCCGACAAGAAATTTTGCTACCTTAGGATCG 33415965 Query 448 TTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||| | |||| | |||| || | | ||||| || Sbjct 33415966 TTACAATTACGGTTGTCGTTCACCGAGACTTCAGTT 33416001 >seq10 Length=43275151 Score = 89.7 bits (98), Expect = 2e-15 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||| ||| ||||| | ||||||||||||||||||||| ||||| |||| |||| || Sbjct 41824460 TCGTTATGCCTTTCGTACGGGTCGGAACTTACCCGACAAGAAATTTTGCTATCTTAAGAC 41824519 Query 446 GGTTATAGTTACCACCG 462 ||||||||||| |||| Sbjct 41824520 CGTTATAGTTACGACCG 41824536 >seq8 Length=59662532 Score = 87.8 bits (96), Expect = 6e-15 Identities = 143/204 (70%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 24481059 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 24481000 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | |||| |||||||| |||||||||||| ||| |||||| | | ||||||| Sbjct 24480999 GTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTGGGGAGGCCTA-CGCCCCAT 24480941 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | ||||||||| || || || ||| |||||||||| || Sbjct 24480940 AGAAACTGTCTACCTGAGACTGTCCCCCGGCCCGTAGGTCCTGGCACAAGGTTAGAATTC 24480881 Query 178 CACTACGGTCAGAGTGGTATTTCA 201 | | ||||||||||| ||| Sbjct 24480880 TAGCTCTTCCAGAGTGGTATCTCA 24480857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702387947008