Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 1e-16
seq10 89.7 2e-15
seq8 87.8 6e-15
>seq2
Length=49040938
Score = 93.3 bits (102), Expect = 1e-16
Identities = 78/96 (81%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 388 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGG 447
|||||| | |||||||||||||||||||| |||||||| ||||| ||||||||||||| |
Sbjct 33415906 GTTACGTCTTTCGTGCAGGTCGGAACTTATCCGACAAGAAATTTTGCTACCTTAGGATCG 33415965
Query 448 TTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483
||| | |||| | |||| || | | ||||| ||
Sbjct 33415966 TTACAATTACGGTTGTCGTTCACCGAGACTTCAGTT 33416001
>seq10
Length=43275151
Score = 89.7 bits (98), Expect = 2e-15
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
|||||| ||| ||||| | ||||||||||||||||||||| ||||| |||| |||| ||
Sbjct 41824460 TCGTTATGCCTTTCGTACGGGTCGGAACTTACCCGACAAGAAATTTTGCTATCTTAAGAC 41824519
Query 446 GGTTATAGTTACCACCG 462
||||||||||| ||||
Sbjct 41824520 CGTTATAGTTACGACCG 41824536
>seq8
Length=59662532
Score = 87.8 bits (96), Expect = 6e-15
Identities = 143/204 (70%), Gaps = 4/204 (2%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || |||| |||||||||||||||| ||| || ||||| | || ||
Sbjct 24481059 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 24481000
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
| | | |||| |||||||| |||||||||||| ||| |||||| | | |||||||
Sbjct 24480999 GTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTGGGGAGGCCTA-CGCCCCAT 24480941
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177
||||| | ||| | ||||||||| || || || ||| |||||||||| ||
Sbjct 24480940 AGAAACTGTCTACCTGAGACTGTCCCCCGGCCCGTAGGTCCTGGCACAAGGTTAGAATTC 24480881
Query 178 CACTACGGTCAGAGTGGTATTTCA 201
| | ||||||||||| |||
Sbjct 24480880 TAGCTCTTCCAGAGTGGTATCTCA 24480857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702387947008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |