Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 3e-16 seq10 75.2 2e-11 >seq6 Length=31977256 Score = 91.5 bits (100), Expect = 3e-16 Identities = 126/175 (72%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| ||||||||| | | ||| |||| || ||| |||||| || ||| | || Sbjct 16514251 CCTTCTACCTTCACGCGGCATTGCTCTGTCAGGCTTTCGCCCATTGCGGAAAATTTCCCA 16514310 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||||||||| ||||| ||| ||||||||||| ||| ||||| || | |||||| Sbjct 16514311 CTGCTGCCTCCCGT-GGAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCT 16514369 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | || | ||| ||| | | || ||| | || || | || |||| ||||| Sbjct 16514370 CGGACCAGCTACTGATCATCGCCTTGGTAAGTTATTGCCTCACCAACTAGCTAAT 16514424 >seq10 Length=43275151 Score = 75.2 bits (82), Expect = 2e-11 Identities = 91/124 (73%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 154 AATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGG 213 || |||| ||||| ||||| || ||||||| ||| |||||||||||| ||| ||||| Sbjct 39025752 AAAATTCTCCACTGTTGCCTTCCCTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT 39025811 Query 214 GACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTA 273 || | ||||||| || | |||| ||| | | || ||| || || || | || |||| Sbjct 39025812 GATCATCCTCTCGGACCTGCTATTGATCATTGTCTTGGTAAGCTATTGCCTCACCAACTA 39025871 Query 274 CCTA 277 ||| Sbjct 39025872 GCTA 39025875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068792432896