Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq6 91.5 3e-16
seq10 75.2 2e-11
>seq6
Length=31977256
Score = 91.5 bits (100), Expect = 3e-16
Identities = 126/175 (72%), Gaps = 1/175 (1%)
Strand=Plus/Plus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| ||||||||| | | ||| |||| || ||| |||||| || ||| | ||
Sbjct 16514251 CCTTCTACCTTCACGCGGCATTGCTCTGTCAGGCTTTCGCCCATTGCGGAAAATTTCCCA 16514310
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||||||||||||| ||||| ||| ||||||||||| ||| ||||| || | ||||||
Sbjct 16514311 CTGCTGCCTCCCGT-GGAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCT 16514369
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| || | ||| ||| | | || ||| | || || | || |||| |||||
Sbjct 16514370 CGGACCAGCTACTGATCATCGCCTTGGTAAGTTATTGCCTCACCAACTAGCTAAT 16514424
>seq10
Length=43275151
Score = 75.2 bits (82), Expect = 2e-11
Identities = 91/124 (73%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 154 AATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGG 213
|| |||| ||||| ||||| || ||||||| ||| |||||||||||| ||| |||||
Sbjct 39025752 AAAATTCTCCACTGTTGCCTTCCCTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT 39025811
Query 214 GACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTA 273
|| | ||||||| || | |||| ||| | | || ||| || || || | || ||||
Sbjct 39025812 GATCATCCTCTCGGACCTGCTATTGATCATTGTCTTGGTAAGCTATTGCCTCACCAACTA 39025871
Query 274 CCTA 277
|||
Sbjct 39025872 GCTA 39025875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068792432896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |