Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq11 102 1e-19
seq7 80.6 4e-13
seq1 78.8 2e-12
seq2 73.4 6e-11
>seq11
Length=50367376
Score = 102 bits (112), Expect = 1e-19
Identities = 98/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 21156678 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 21156621
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | | ||||||||| |||||||||||||||||||||||| || |
Sbjct 21156620 GGCGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 21156561
Query 121 GAA 123
|||
Sbjct 21156560 GAA 21156558
Score = 102 bits (112), Expect = 1e-19
Identities = 98/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 21310522 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 21310465
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | | ||||||||| |||||||||||||||||||||||| || |
Sbjct 21310464 GGCGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 21310405
Query 121 GAA 123
|||
Sbjct 21310404 GAA 21310402
>seq7
Length=51758522
Score = 80.6 bits (88), Expect = 4e-13
Identities = 92/123 (75%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | || || | | ||||||| | | | || ||| || ||||
Sbjct 24320391 GTACGAGAGGAACTGTTGATTT--GCACAATTGGTAATCGTGCTTGGTTGAAAAGCCAGT 24320334
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||| ||| | | | ||||||||| ||||||| ||||||||||||||||| | |
Sbjct 24320333 GGCGCGAATCTAGCGTGCGTTGGATTATGACTGAACGTCTCTAAGTCAGAATCCAGACTA 24320274
Query 121 GAA 123
|||
Sbjct 24320273 GAA 24320271
Score = 75.2 bits (82), Expect = 2e-11
Identities = 92/123 (75%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||| |||| || ||| | | ||||||| | ||| ||| ||| || || |
Sbjct 24164221 GTACGAGAGGCACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGTTTGAAAAGTCAAT 24164164
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| | |||||||| | | ||||||||| |||||| ||||||||||||||| | || |
Sbjct 24164163 GGCACGAAGCTAGCGTGCATTGGATTATGACTGAACACCTCTAAGTCAGAATTCGGGCTA 24164104
Query 121 GAA 123
|||
Sbjct 24164103 GAA 24164101
>seq1
Length=52205531
Score = 78.8 bits (86), Expect = 2e-12
Identities = 57/66 (86%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117
|||| |||||||||||||| | ||||||||| ||||||||||||||||||||||| |
Sbjct 12173259 AGTGGCGCGAAGCTACCATGCGTTGGATTATGATTGAACGCCTCTAAGTCAGAATCCGGG 12173318
Query 118 CCAGAA 123
| ||||
Sbjct 12173319 CTAGAA 12173324
>seq2
Length=49040938
Score = 73.4 bits (80), Expect = 6e-11
Identities = 86/114 (75%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||| |||||||||| || ||| | | |||||| | ||| || ||| || ||||
Sbjct 5491489 GTACAAGAGGAACCGTTGA-TTC-GCACCATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 5491546
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| | ||||||||| | | | ||||||| |||||||||||||||| |||||||
Sbjct 5491547 GGCATGAAGCTACCGTGCGTTAGATTATGACTGAACGCCTCTAAGTAAGAATCC 5491600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819194381312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |