Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq11 102 1e-19 seq7 80.6 4e-13 seq1 78.8 2e-12 seq2 73.4 6e-11 >seq11 Length=50367376 Score = 102 bits (112), Expect = 1e-19 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 21156678 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 21156621 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | | ||||||||| |||||||||||||||||||||||| || | Sbjct 21156620 GGCGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 21156561 Query 121 GAA 123 ||| Sbjct 21156560 GAA 21156558 Score = 102 bits (112), Expect = 1e-19 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 21310522 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 21310465 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | | ||||||||| |||||||||||||||||||||||| || | Sbjct 21310464 GGCGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 21310405 Query 121 GAA 123 ||| Sbjct 21310404 GAA 21310402 >seq7 Length=51758522 Score = 80.6 bits (88), Expect = 4e-13 Identities = 92/123 (75%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | || || | | ||||||| | | | || ||| || |||| Sbjct 24320391 GTACGAGAGGAACTGTTGATTT--GCACAATTGGTAATCGTGCTTGGTTGAAAAGCCAGT 24320334 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||| ||| | | | ||||||||| ||||||| ||||||||||||||||| | | Sbjct 24320333 GGCGCGAATCTAGCGTGCGTTGGATTATGACTGAACGTCTCTAAGTCAGAATCCAGACTA 24320274 Query 121 GAA 123 ||| Sbjct 24320273 GAA 24320271 Score = 75.2 bits (82), Expect = 2e-11 Identities = 92/123 (75%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||| |||| || ||| | | ||||||| | ||| ||| ||| || || | Sbjct 24164221 GTACGAGAGGCACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGTTTGAAAAGTCAAT 24164164 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||||||| | | ||||||||| |||||| ||||||||||||||| | || | Sbjct 24164163 GGCACGAAGCTAGCGTGCATTGGATTATGACTGAACACCTCTAAGTCAGAATTCGGGCTA 24164104 Query 121 GAA 123 ||| Sbjct 24164103 GAA 24164101 >seq1 Length=52205531 Score = 78.8 bits (86), Expect = 2e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117 |||| |||||||||||||| | ||||||||| ||||||||||||||||||||||| | Sbjct 12173259 AGTGGCGCGAAGCTACCATGCGTTGGATTATGATTGAACGCCTCTAAGTCAGAATCCGGG 12173318 Query 118 CCAGAA 123 | |||| Sbjct 12173319 CTAGAA 12173324 >seq2 Length=49040938 Score = 73.4 bits (80), Expect = 6e-11 Identities = 86/114 (75%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| |||||||||| || ||| | | |||||| | ||| || ||| || |||| Sbjct 5491489 GTACAAGAGGAACCGTTGA-TTC-GCACCATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 5491546 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | | ||||||||| | | | ||||||| |||||||||||||||| ||||||| Sbjct 5491547 GGCATGAAGCTACCGTGCGTTAGATTATGACTGAACGCCTCTAAGTAAGAATCC 5491600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819194381312