Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq6 210 3e-49 seq7 132 6e-26 seq9 131 2e-25 seq1 131 2e-25 seq2 129 7e-25 seq8 122 1e-22 seq4 107 2e-18 >seq6 Length=31977256 Score = 210 bits (232), Expect = 3e-49 Identities = 483/715 (68%), Gaps = 27/715 (4%) Strand=Plus/Plus Query 190275 TGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATGCTTCGTCAGTTT 190334 ||| ||||||| | ||||| || ||||| | |||| | | |||| | | ||| | | Sbjct 21888305 TGGACTTTTGTTGTTCTCCATGGTGCTTTTGGATTAATACGTTCCATGTTACATCAATCT 21888364 Query 190335 GAACTGGCACG-TCTCATCGGTATCCGTCCTTACAATGCT---ATTGCGTTCTCTGGTCC 190390 ||||| || | | | || | | | ||||| ||| | ||||| ||||| ||||| Sbjct 21888365 GAACTTGCTCAATTTTTTCAAT-TACAACCTTATAATAATGTAATTGCATTCTCAGGTCC 21888423 Query 190391 TATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTT 190450 || | | |||||||| || || || || || || |||||||| | |||| ||||| Sbjct 21888424 AATTGTTATTTTTGTTTATGTATTCCTTATTTATCCACTGGGTCAGTTTGGTTGATTCTT 21888483 Query 190451 CGCGCCATCCTTCGGTGTGGCAGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCA 190510 || || || || ||||| | || | || || | || || || | || || Sbjct 21888484 TGCTCCTAGTTTTAATGGAGCAGCTAATTTTCAAATCATCATATTTTTCCAAAGATTTCA 21888543 Query 190511 TAACTGGACGCTGAACCCCTTCCACATGATGGGTGTTG-CAG-GTATCCTGGGAGGAGCA 190568 || ||||| | ||||| || || ||| |||| |||| || |||| |||| | ||| Sbjct 21888544 TACTTGGACATTAAACCCATTTCATATGCTGGGAGTTGTCATTGTAT--TGGGTGTTGCA 21888601 Query 190569 CTACTGTCAGCAATCCATGGTGTGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAA 190628 ||||| | || || ||||||| || ||||| | |||||| | |||||||||||| Sbjct 21888602 CTACTATGCGCTATTCATGGTGCAACGGTAGAAAGTACTTTATTTGAAGATGGTGATGGT 21888661 Query 190629 GCAAACACGTTTAAAGCATTCGACTCTACACAA-GAGGAAGAGACCTATTCGATGGTCAC 190687 | ||| || ||| || || || | || ||| | || | |||||||| ||| | || Sbjct 21888662 GAAAATACATTTTGTGCTTTTAACCCAACCCAACCCGAAAAAAACCTATTCAATGATTAC 21888721 Query 190688 TGCCAACCGTTTCTGGTCTCAAATCTTTGGTGTTG-CGTTCAGTAATAAGAGGTGGTTGC 190746 || || || || ||||| ||||||||||| |||| ||| ||||||| ||||| | Sbjct 21888722 TGTTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGTTTTTCTCTAATAAGCATTGGTTAC 21888781 Query 190747 ATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTGTGGA--CTTCTTCCATCGGTATTAT 190804 |||| |||||| | ||||| || || | || | || | | ||| | || || | Sbjct 21888782 ATTTATTTATGTTGTTTGTACCAGTAACTCGTTTATGAATGAGTGTTC--TTGGGATAGT 21888839 Query 190805 TGG-TCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAG 190863 ||| || | || | ||||| ||||||||||| || || || ||||| ||| | ||| || Sbjct 21888840 TGGTTCGTCCT-TGAACCTACGTGCTTATGATTTCGTTTCTCAAGAAATCTGTGCAATAG 21888898 Query 190864 AAGATCCAGAGTTCGAGACTTTTTACACAAAAAATATACTTTTGAATGAAGGTCTTCGTT 190923 | || ||||||| ||||| |||||||| | || || |||||| ||||| Sbjct 21888899 A----------TTTAAGACTTTATACACTAAAAATATTTTCTTAAACGAAGGTATTCGTG 21888948 Query 190924 CATGGTTGGCACCTGTTGATCAACCCCATGAGAATTTTGTATTTCCAGAAGAAGT 190978 ||||| || || || |||| | ||||| || ||| |||| | ||||| || Sbjct 21888949 CATGGATGACAACTCAAAATCAGTCTCATGAAAACTTTATATTCCTTGAAGAGGT 21889003 >seq7 Length=51758522 Score = 132 bits (146), Expect = 6e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 189177 CTACATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCTTGGATCTGC-A 189235 ||||||||||||||| || ||||| || ||||| ||||||||||||||||| ||| Sbjct 47750128 CTACATGGGTCGTGAATGAGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGAT-TGCTG 47750186 Query 189236 TTGCTTACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTGGTCTATCCTTTTGGTC 189295 |||| || || || ||||||||||| || | || || || || |||||||| |||||| Sbjct 47750187 TTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTC 47750246 Query 189296 AAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGAACCTTCAACTACATGCTTG 189355 |||| || || || | ||||| || || || ||| || ||||| | ||| ||| Sbjct 47750247 AAGGAAGCTTTTCGGATGGTATGCCTTTAGGAATTTCTGGTACTTTCAATTTTATGATTG 47750306 Query 189356 TCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTT 189392 | || || || ||||| || || || ||||| || || Sbjct 47750307 TATTTCAGGCTGAGCATAATATTCTTATGCATCCATT 47750343 >seq9 Length=37469608 Score = 131 bits (144), Expect = 2e-25 Identities = 463/711 (65%), Gaps = 28/711 (4%) Strand=Plus/Plus Query 188951 TCGCCTTTGTCGCTGCACCCCCTGTAGACATTGATGGCATCCGCGAACCCGTCGCTGGTT 189010 |||| ||| ||| ||| || || || || | |||||| || | ||| || || ||| | Sbjct 1917814 TCGCTTTTATCGTTGCCCCTCCAGTGGATAATGATGGTATTCACGAGCCTGTTTTTGGAT 1917873 Query 189011 CACTCATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCTTCATCCAACGCAATTG 189070 | || | ||||||||||| ||||| |||||||| | | | | | | || || | Sbjct 1917874 CCCTACTTTATGGAAACAATATCATTTCTGGTGCGACTATTCATACTTTTGCGGCTATAG 1917933 Query 189071 GTCTTCACTTCTACCCCATCTGGGAAGCCGCCTCACTCGATGAGTGGCTCTACAACGGTG 189130 | | || || || || || ||||||| | | | ||||| || || ||||||| | Sbjct 1917934 ATTTGCATTTTTATCCTATATGGGAAGTGACTTTTGTTGATGAATGCCTATACAACGACG 1917993 Query 189131 GTCCTTTCCAACTGGTAGTCTTCCACTTCCT-CATCG-GCATCTACGCCTACATGGGTCG 189188 |||||| |||| | || | || ||| | | | | | | || |||||||||||| Sbjct 1917994 GTCCTTATGAACTAATTGTTCTACATTTCTTACTTAGTGTAGCTTG--CTACATGGGTCG 1918051 Query 189189 TGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCTTGGATCTGC-ATTGCTTACTCTG 189247 ||| |||||||| | ||| | ||||||| || |||||| ||| |||| || || Sbjct 1918052 TGAATGGGAACTTAACTTTCGTTTGGGTATGCATCATTGGAT-TGCTGTTGCATATTCAA 1918110 Query 189248 CACCTGTTGCAGCAGCATCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCT 189307 | |||| |||||| | | || || || |||||||| |||||||||| || | Sbjct 1918111 CTCCTGATGCAGCTGTTATTGTTGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTT 1918170 Query 189308 CTGACGCAATGCCCTTGGGTATCAGTGGAACCTTCAACTACATGCTTGTCTTCCAAGCAG 189367 | || | |||||| || || || ||| || ||||| | ||| |||| || || | Sbjct 1918171 CGGATGGAATGCCTTTAGGAATTTATGGTACTTTCAATTTTATGATTGTATTTCAGATTG 1918230 Query 189368 AGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTCGCAGGTGTCTTCGGTGGTT 189427 |||| || || || ||||| | || ||| || | | || | ||||| || || | Sbjct 1918231 AGCATAATATTCTTATGCATCAATTTCACGTGTTAAGTGTGACTGGTGTATTTGGCAACT 1918290 Query 189428 CACTGTTCTCCGCAATGCATGGTTCACTCGTTACCTCTTCACTGGTTCGTGAAACCACTG 189487 | || ||| || || ||| ||| | || || ||| | | | || || Sbjct 1918291 CCCTATTCAGTGCTATAAATGATTCCTTAGTAAC--TTTC-----TACCTTAA-----TG 1918338 Query 189488 AAACCGAGTCCCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCG 189547 || || || | |||||||| ||||| ||| | || ||| || | || Sbjct 1918339 AA------TCTGCTAATGAAGGTTACAAATTTGGTCAAAAGGACAAAATCTATGATATTA 1918392 Query 189548 TTGCTGCTCATGGATATTTCGGTCGTCTT-ATCTTCCAATATGCATCGTTCAACAACTCC 189606 | |||||||||| ||||| |||| || ||||| ||||||||| ||||| || || Sbjct 1918393 TAGCTGCTCATGATTATTT-TGTCGGATTGATCTTTCAATATGCAAGTTTCAATAATTCT 1918451 Query 189607 CGTTCACTTCACTTCTTCCTCGCTGCCTGGCCAGTCGTGGGTATCTGGTTT 189657 |||| || | || ||||| | || ||| | || | ||||| |||||| Sbjct 1918452 CGTT-TTTTAATTTTTTCCTAGTTGTTTGG-CTGTAATAGGTATTTGGTTT 1918500 >seq1 Length=52205531 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 190695 CGTTTCTGGTCTCAAATCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTT 190754 || || ||||| ||||||||||| ||||| || ||||| | ||||| ||||||||| Sbjct 38350081 CGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTT 38350140 Query 190755 ATGCTCTTTGTTCCTGTTATGGGTCTGTGGACTTCTTCCATCGGTATTATTGGTCTTGCT 190814 ||| | ||||| || || | ||| | |||| | | | || | | ||| | || Sbjct 38350141 ATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTTTGGCC 38350200 Query 190815 CTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAG 190874 || ||| | ||||||||||| || || || ||||| ||| | ||||| |||||||| || Sbjct 38350201 CTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGCGCAGCGGAAGATCCTGAA 38350260 Query 190875 TTCGAGACTTTTTACACAAAAAATATACTTTT 190906 || |||||||| ||||| |||||||| || || Sbjct 38350261 TTTGAGACTTTCTACACCAAAAATATTCTCTT 38350292 >seq2 Length=49040938 Score = 129 bits (142), Expect = 7e-25 Identities = 232/336 (69%), Gaps = 15/336 (4%) Strand=Plus/Plus Query 190666 AAGAGACCTATTCGATGGTCACTGCCAACCGTTTCTGGTCTCAAATCTTTGGTGTTGCGT 190725 |||| || ||||| ||||| ||| || || || ||||| ||||||||||| ||||| | Sbjct 27893024 AAGAAACTTATTCAATGGTA--TGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTT 27893081 Query 190726 TCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTGTGGA 190785 | || || |||||||||||| | ||||| || || || ||| | |||| Sbjct 27893082 TTTCCAA----------TTACATTTCTTTATGTTATTTGTACCAGTAATTGGTTTATGGA 27893131 Query 190786 CTTCTTCCATCGGTATTATTGGTCTTGCTCTCAACCTT-CGTGCTTATGACTTTGTATCC 190844 | | | | || | ||| | | || ||||| ||||||||||| || || || Sbjct 27893132 TGAGTGCTCTTAGGATAGTCGGT-TAGGCCTTGACCTTACGTGCTTATGATTTCGTTTCT 27893190 Query 190845 CAAGAGA-TCAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTTTACACAAAAAATATACT 190903 ||||| | | | ||||| |||||||| || || || | ||| ||||| |||||||| || Sbjct 27893191 CAAGAAATTTTGCGCAGCGGAAGATCCTGAATTTGATATTTTATACACCAAAAATATTCT 27893250 Query 190904 TTTGAATGAAGGTCTTCGTTCATGGTTGGCACCTGTTGATCAACCCCATGAGAATTTTGT 190963 || || |||||| ||||| ||| | ||| || ||||| | ||||| || || | Sbjct 27893251 CTTAAACGAAGGTATTCGTGTGTGGATTGCAGCTCAAGATCAGCTTCATGAAAACCTTAT 27893310 Query 190964 ATTTCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 190999 ||| || || || || | ||| | || |||||||| Sbjct 27893311 ATTCCCTGAGGAGGTTCTACCACGTGGTAACGCTCT 27893346 >seq8 Length=59662532 Score = 122 bits (134), Expect = 1e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 189700 TTCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACACATGGGCAGAC 189759 || || ||||| |||||| | ||||| ||||||||||||| | || || ||||| || Sbjct 31293222 TTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGAT 31293281 Query 189760 GTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAACTTC 189819 || | ||||| ||| ||||||||||||||||||||||| ||||| ||||| || ||| Sbjct 31293282 ATTATTAACCGAGCTAACCTTGGTATGGAAGTCATGCATGAACGTAATGCTCATAATTTC 31293341 Query 189820 CCTCTTGATCTGGCAGC 189836 ||||| ||||| || || Sbjct 31293342 CCTCTAGATCTAGCTGC 31293358 Score = 120 bits (132), Expect = 4e-22 Identities = 182/258 (71%), Gaps = 11/258 (4%) Strand=Plus/Minus Query 190677 TCGATGGTCACTGCCAACCGTTTCTGGTCTCAAATCTTTGGTGTTGCGTTCAGTAATAAG 190736 || ||||| ||||| || || || ||||| ||||||||||| ||||| || | || Sbjct 1232871 TCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTT---TCAT--- 1232818 Query 190737 AGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTGTGGACTTCTTCCATC 190796 ||||| |||||||||||| | ||||| || || | ||| | || | | | | Sbjct 1232817 ---TGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGAATGAGTGCTCTT 1232761 Query 190797 GGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGA 190856 || | | ||| | || | ||| | |||||||||| || || || ||||| ||| | Sbjct 1232760 GGGGTGGTCGGTTTGGCCGTGAACTTATGTGCTTATGATTTCGTTTCTCAAGAAATCCGC 1232701 Query 190857 GCAGCAGAAGATCCAGAGTTCGAGACTTTTTACACAAAAAATATACTTTTGAATGAAGGT 190916 ||||| ||| |||| || || |||||||| ||| |||||||| || || || ||||| Sbjct 1232700 GCAGCGGAATATCCTGAATTTGAGACTTTCAACAACAAAAATATTCTCTTAAA--AAGGT 1232643 Query 190917 CTTCGTTCATGGTTGGCA 190934 ||||| | ||| ||||| Sbjct 1232642 ATTCGTGCGTGGATGGCA 1232625 >seq4 Length=45960019 Score = 107 bits (118), Expect = 2e-18 Identities = 137/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 190815 CTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAG 190874 || ||| | ||||||||||| || || || ||||| ||| | ||| | ||||| | || Sbjct 43482223 CTGAACTTACGTGCTTATGATTTCGTTTCTCAAGAAATCCGTGCATGA-AAGATTCTGAA 43482281 Query 190875 TTCGAGACTTTTTACAC-AAAAAATATACTTTTGAATGAAGGTCTTCGTTCATGGTTGGC 190933 || || ||||| ||||| ||||||||| || || || |||||| ||||| | ||| |||| Sbjct 43482282 TTTGATACTTTGTACACAAAAAAATATTCTCTTAAACGAAGGTATTCGTGCGTGGATGGC 43482341 Query 190934 ACCTGTTGATCAACCCCATGAGAATTTTGTATTTCCAGAAGAAGTATTGCCAAGAGGCAA 190993 | | ||||| || ||||| || || |||| || || || || | ||| | || || Sbjct 43482342 AATTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAA 43482401 Query 190994 CGCTCT 190999 |||||| Sbjct 43482402 CGCTCT 43482407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634074388392000