Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12] 9,615 sequences; 496,032,534 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq9615 226 7e-57 seq414 226 7e-57 seq7 226 7e-57 seq223 221 3e-55 seq119 192 2e-46 seq1971 107 5e-21 >seq9615 Length=156766 Score = 226 bits (250), Expect = 7e-57 Identities = 296/409 (72%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 102583 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 102642 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 102643 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 102702 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||||| || |||| | || Sbjct 102703 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTGCCAAGCTGGAGTACGGTAGG 102762 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 102763 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 102822 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||| ||| | ||||| |||||||| || | |||||||| ||||||| || | Sbjct 102823 TGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 102882 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||| | | || | | | Sbjct 102883 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTGGGCGCTGTGCGTATCGA 102942 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 102943 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 102991 Score = 226 bits (250), Expect = 7e-57 Identities = 296/409 (72%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 139073 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 139014 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 139013 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 138954 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||||| || |||| | || Sbjct 138953 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTGCCAAGCTGGAGTACGGTAGG 138894 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 138893 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 138834 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||| ||| | ||||| |||||||| || | |||||||| ||||||| || | Sbjct 138833 TGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 138774 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||| | | || | | | Sbjct 138773 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTGGGCGCTGTGCGTATCGA 138714 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 138713 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 138665 >seq414 Length=232653 Score = 226 bits (250), Expect = 7e-57 Identities = 296/409 (72%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 211158 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 211217 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 211218 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 211277 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||||| || |||| | || Sbjct 211278 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTGCCAAGCTGGAGTACGGTAGG 211337 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 211338 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 211397 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||| ||| | ||||| |||||||| || | |||||||| ||||||| || | Sbjct 211398 TGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 211457 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||| | | || | | | Sbjct 211458 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTGGGCGCTGTGCGTATCGA 211517 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 211518 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 211566 >seq7 Length=3634883 Score = 226 bits (250), Expect = 7e-57 Identities = 296/409 (72%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 3423033 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 3423092 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 3423093 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 3423152 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||||| || |||| | || Sbjct 3423153 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTGCCAAGCTGGAGTACGGTAGG 3423212 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 3423213 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 3423272 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||| ||| | ||||| |||||||| || | |||||||| ||||||| || | Sbjct 3423273 TGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 3423332 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||| | | || | | | Sbjct 3423333 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTGGGCGCTGTGCGTATCGA 3423392 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 3423393 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 3423441 >seq223 Length=428319 Score = 221 bits (244), Expect = 3e-55 Identities = 295/409 (72%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||| ||||||||||||||| ||| ||| Sbjct 77790 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAACAGCCGCGGTAATACAGAGGATGC 77849 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 77850 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 77909 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||||| || |||| | || Sbjct 77910 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTGCCAAGCTGGAGTACGGTAGG 77969 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 77970 GGCAGAGGGAATTTCTGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 78029 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||| ||| | ||||| |||||||| || | |||||||| ||||||| || | Sbjct 78030 TGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 78089 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||| | | || | | | Sbjct 78090 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTGGGCGCTGTGCGTATCGA 78149 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 78150 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 78198 >seq119 Length=756297 Score = 192 bits (212), Expect = 2e-46 Identities = 246/334 (74%), Gaps = 10/334 (3%) Strand=Plus/Minus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||| |||| |||||||||| |||||||||||||||||||| ||| ||| ||||| Sbjct 734077 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTC 734018 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAA- 126 || ||||||| ||||||||||||| | || ||||||| | | ||| ||||| Sbjct 734017 TTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTG-----AATCGGGT-TGAAAG 733964 Query 127 TCCCCG--GGCTTAACCTGG-GAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAG 183 || | | | || |||| | | ||| | | || ||| ||||| | ||||| Sbjct 733963 TCAAAGTCGCCAAAAACTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAG 733904 Query 184 GGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGC 243 | | |||||||| | |||||| ||||||| || |||| | | |||||| |||| || Sbjct 733903 GAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCCAAAAGC 733844 Query 244 GAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGG 303 ||||||||| | ||||| || |||||| | ||||||| |||||||| ||| || Sbjct 733843 GAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACGGG 733784 Query 304 ATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||||||||||| ||| |||||||| Sbjct 733783 ATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 733750 >seq1971 Length=31893 Score = 107 bits (118), Expect = 5e-21 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71 |||||||| |||||||| |||||| |||||||||||||| ||| || |||||||| Sbjct 17867 AATAAGCATTGGCTAACTCTGTGCCAATAGCCGCGGTAATACAGAGGATGTAAGCGTTAT 17808 Query 72 TCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCC 131 |||||| | ||||||| |||||| ||| || | | |||| | | || |||||| Sbjct 17807 CCGGAATGATTGGGCGTGAAGCGTCTATAGGTGGCTTTTTAAGTCCGCCGTCAAATCCTA 17748 Query 132 GGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGG 191 |||| |||| || || | | | ||| ||||||| | || || | || Sbjct 17747 AGGCTCAACCCTGGTTAGGCGGTGGAAATTGCCAAGCTAGAGTATAGTAGGGGTAGAGGG 17688 Query 192 AATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 |||| ||| || |||||||||||||| || | | ||||||||| || ||| ||| Sbjct 17687 AATTTACGGTGGAGAGGTGAAATGCGTAGAGATCAGAAAGAACACCAACGGTGAAAGCA 17629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289476004960