Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12] 9,615 sequences; 496,032,534 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq184 87.8 3e-15 seq169 75.2 2e-11 >seq184 Length=546518 Score = 87.8 bits (96), Expect = 3e-15 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 183 AAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTT 242 || |||||||||||| | ||||| ||||| |||| ||||| || || ||||| ||| Sbjct 492911 AAAGATGGGCAAAATGGGCAATTGGAGAAGATCAATGTGCCTGAAGAGTTCTCTGGGTTT 492970 Query 243 GTGCAATCTGGATGCTGTGTGGAGATCT 270 || |||||||| |||||||||||||||| Sbjct 492971 GTTCAATCTGGCTGCTGTGTGGAGATCT 492998 >seq169 Length=587619 Score = 75.2 bits (82), Expect = 2e-11 Identities = 67/84 (80%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 185 GGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGT 244 |||||| |||||| |||||| | ||| | |||| | | |||||||| ||||||||| Sbjct 250995 GGATGGACAAAATGGTAAATGGGAGAAGTTAAATGTGACAGGTGAATTTTGTGGATTTGT 251054 Query 245 GCAATCTGGATGCTGTGTGGAGAT 268 ||||| || |||||||||||||| Sbjct 251055 TCAATCCGGCTGCTGTGTGGAGAT 251078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918311695840