Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12]
9,615 sequences; 496,032,534 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq9615 268 1e-69
seq7 268 1e-69
seq119 205 1e-50
seq223 187 4e-45
seq64 176 7e-42
seq36 158 2e-36
seq7051 152 8e-35
seq966 127 3e-27
seq343 105 1e-20
seq124 100 4e-19
seq37 75.2 2e-11
>seq9615
Length=156766
Score = 268 bits (296), Expect = 1e-69
Identities = 224/273 (82%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| ||||||||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 108841 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 108782
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 108781 TTTACCGTGGGCACAATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 108722
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 108721 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 108662
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || |
Sbjct 108661 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 108602
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
||| |||||||||| | || ||||||||||||
Sbjct 108601 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 108569
Score = 268 bits (296), Expect = 1e-69
Identities = 224/273 (82%), Gaps = 1/273 (0%)
Strand=Plus/Plus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| ||||||||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 132815 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 132874
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 132875 TTTACCGTGGGCACAATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 132934
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 132935 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 132994
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || |
Sbjct 132995 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 133054
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
||| |||||||||| | || ||||||||||||
Sbjct 133055 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 133087
>seq7
Length=3634883
Score = 268 bits (296), Expect = 1e-69
Identities = 224/273 (82%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| ||||||||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 3429291 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 3429232
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 3429231 TTTACCGTGGGCACAATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 3429172
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 3429171 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 3429112
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || |
Sbjct 3429111 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 3429052
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
||| |||||||||| | || ||||||||||||
Sbjct 3429051 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 3429019
>seq119
Length=756297
Score = 205 bits (226), Expect = 1e-50
Identities = 196/251 (78%), Gaps = 4/251 (2%)
Strand=Plus/Plus
Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88
|||| || | || | | ||||||||||||| || ||| || ||| ||||| ||| |
Sbjct 476646 CAGCAGTTCTTCCATACCAACTTAGCTTCCCGGCGCTGCTATTAGCATAACAACCGGTAC 476705
Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT- 147
|||| ||||| | ||| ||| |||||||||||||| || |||||||||| | |||
Sbjct 476706 ACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCTCAGTTCTCCCT 476765
Query 148 ---ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204
|| || ||| |||||| ||||||||||||| ||||||||| |||||| ||| |||
Sbjct 476766 TTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGT 476825
Query 205 GCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACG 264
|| ||| ||| |||||||| || |||||||||||||| ||||| |||||||||| || |
Sbjct 476826 ACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATG 476885
Query 265 AGCCGACATCG 275
|| ||||||||
Sbjct 476886 AGTCGACATCG 476896
>seq223
Length=428319
Score = 187 bits (206), Expect = 4e-45
Identities = 141/166 (85%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 110 GTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACC 169
|||||||| ||||| ||| || ||||||||| || |||||||| |||||| |||||
Sbjct 84381 GTCCTCTCATACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACC 84322
Query 170 GAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCA 229
|||||||||| |||||||||||||||||||| ||| || ||||||| ||||||||| |||
Sbjct 84321 GAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATTGGCGAACAGTCCA 84262
Query 230 ACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|||||||| || |||| |||||||||| | || ||||||||||||
Sbjct 84261 ACCCTTGGAACATACTACAGCCCCAGGTGGTGAAGAGCCGACATCG 84216
>seq64
Length=1126094
Score = 176 bits (194), Expect = 7e-42
Identities = 195/259 (75%), Gaps = 1/259 (0%)
Strand=Plus/Minus
Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTG-GCA 75
||||||| | |||| | |||||| | | |||| ||| ||||||| | | | |||
Sbjct 704560 CTTAGATACTTTCAACAATTATCCGCTTCGCACTTGGCTACCCAGCTTTTACCGCGAGCA 704501
Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135
| ||||||| || || |||| ||| || ||||||| |||||||||| | || ||||
Sbjct 704500 CAATAACTGGTACATCAAAGGTGCATCCTTCTCGGTCCTTTCGTACTAAGAAAAGGTCCT 704441
Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195
||||| || |||||||| |||||| ||| | ||||||||| |||| ||||||||||
Sbjct 704440 CTCAATGCTCTAACGCCCACACCGGATATGGATCTAACTGTCTCACGACATTCTGAACCC 704381
Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255
||||| || || |||||||||| ||||| |||||| ||||| || || || ||| ||
Sbjct 704380 AGCTCATGTACCACTTTAATGGGTGAACAACCCAACTCTTGGAACACGCTGCATCCCTAG 704321
Query 256 GATGAGACGAGCCGACATC 274
| | || |||||||||||
Sbjct 704320 GTGGCGAAGAGCCGACATC 704302
>seq36
Length=1800412
Score = 158 bits (174), Expect = 2e-36
Identities = 191/259 (74%), Gaps = 1/259 (0%)
Strand=Plus/Plus
Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTG-GCA 75
||||||||| |||| |||||| ||| ||||| || |||| | | | || |||
Sbjct 1517615 CTTAGATGCTTTCATTAGTTATCCGCTCCGCACTTAACTACCCAACATTTATCGTGAGCA 1517674
Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135
| ||||||| ||| |||||| ||||| |||| | ||||| |||||| | | || ||||
Sbjct 1517675 TAATAACTGGTACACTAGAGGTATGTCCTTCCCAGCCCTCTTGTACTAGGAAAAGGTCCT 1517734
Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195
| || || || ||||| || ||| |||| ||||| |||| ||| || |||||||
Sbjct 1517735 TTTAATGCTCTAACACCCACACCGAATATGGACTGAACTATCTCACGATATTTTGAACCC 1517794
Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255
||||| ||| |||| || ||| |||| |||||||||||| || |||| |||||| ||
Sbjct 1517795 AGCTCACGTATAGCTTTGATAGGCAAACAACCCAACCCTTGGAACATACTACAGCCCTAG 1517854
Query 256 GATGAGACGAGCCGACATC 274
| | || |||||||||||
Sbjct 1517855 GTGGCGAGGAGCCGACATC 1517873
>seq7051
Length=1661
Score = 152 bits (168), Expect = 8e-35
Identities = 192/260 (74%), Gaps = 3/260 (1%)
Strand=Plus/Minus
Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTG-GCA 75
||||||||| ||||| |||||| ||| |||||||| |||| | | | || |||
Sbjct 1639 CTTAGATGCTTTCAGTAGTTATCCGCTCCGCACTTAGCTACCCAACATTTATCGTGAGCA 1580
Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135
| ||||||| | |||||||| || |||| | ||||| |||||| | | || ||||
Sbjct 1579 CAATAACTGGTACGCCAGAGGTGCATCTTTCCCAGCCCTCTTGTACTAGGAAAAGGTCCT 1520
Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195
| || || || ||||| || ||| |||| ||||| |||| ||| || |||||||
Sbjct 1519 TTTAATGCTCTAACACCCACACCGAATATGGACTGAACTATCTCACGATATTTTGAACCC 1460
Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255
||||| ||| |||| || ||| |||| |||||||||||| || |||| ||||||||
Sbjct 1459 AGCTCACGTATAGCTTTGATAGGCAAACAACCCAACCCTTGGAACATACTACAGCCCCAA 1400
Query 256 GATGA-GACGAGCCGACATC 274
| ||| || |||||||||||
Sbjct 1399 G-TGACGAGGAGCCGACATC 1381
>seq966
Length=86411
Score = 127 bits (140), Expect = 3e-27
Identities = 186/259 (72%), Gaps = 3/259 (1%)
Strand=Plus/Minus
Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75
||||||||| ||||| |||||| ||| | || ||| |||||| | | | | ||||
Sbjct 83585 CTTAGATGCTTTCAGTAGTTATCCACTCCGGATTTGGCTACCCAGCGTTTACCGTGGGCA 83526
Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135
| ||||||| ||| | |||| | || || || ||||||| ||||| | | || ||||
Sbjct 83525 CAATAACTGGTACACTAAAGGTGCGCCCTTCTCGATCCTCTCTTACTAGGAAAAGGTCCT 83466
Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195
|| || || || ||||| |||| |||| |||| |||| ||| |||||||||||
Sbjct 83465 CTTAATGCTCTAACACCCACACTAGATATGGACTAAACTATCTCACGATGTTCTGAACCC 83406
Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255
||||| | || |||| |||| || |||| ||||||| ||| ||| | ||| | |||
Sbjct 83405 AGCTCATGCACCATTTTATTGGGTGAGTAGCCTAACCCTT-GGAACTATTACAG-CTCAG 83348
Query 256 GATGAGACGAGCCGACATC 274
| |||| |||| |||||
Sbjct 83347 GTGGAGAAGAGCTAACATC 83329
>seq343
Length=285249
Score = 105 bits (116), Expect = 1e-20
Identities = 113/148 (76%), Gaps = 1/148 (1%)
Strand=Plus/Minus
Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75
||||||||| |||||| |||||| |||| |||| ||| || ||| | | | | ||||
Sbjct 238668 CTTAGATGCTTTCAGCAGTTATCCGTTCCGCACTTGGCTACCTAGCATTTACCGTGGGCA 238609
Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135
| ||||||| ||| |||| | ||||| ||||||||||||||||||| ||| |||||||
Sbjct 238608 TAATAACTGGTACACTAGAGATGTGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGCTCCT 238549
Query 136 CTCAAATTTCCTACGCCCACGACGGATA 163
|||| || ||| |||| || |||
Sbjct 238548 TTCAATGCTCTAACGTCCACACCGAATA 238521
>seq124
Length=715905
Score = 100 bits (110), Expect = 4e-19
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 133 CCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAA 192
||||| || ||| || |||| | |||| | | ||||||||||| |||| | | ||
Sbjct 591915 CCTCTTAATGCTCCAACCACCACACCAGATATGAAGCGAACTGTCTCACGACATGCCAAA 591856
Query 193 CCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCC 252
|||||||| ||| || |||||| ||||||||| |||| |||||| || | || |||| |
Sbjct 591855 CCCAGCTCACGTACCGTTTTAATAGGCGAACAGTCCAATCCTTGGAACATGCTACAGCTC 591796
Query 253 CAGGATGAGACGAGCCGACATCG 275
||| || || ||||||| ||||
Sbjct 591795 CAGTTTGTGAAGAGCCGATATCG 591773
>seq37
Length=1716566
Score = 75.2 bits (82), Expect = 2e-11
Identities = 117/165 (71%), Gaps = 2/165 (1%)
Strand=Plus/Minus
Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131
|||| | ||||||| || || |||| ||| | | ||||||||||||| |||||| |
Sbjct 1630299 GGCATAATAACTGGTACAGCAAAGGTGTGTTCTTTTCGGTCCTCTCGTA-TAAGGAAAAT 1630241
Query 132 -TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTG 190
|||||| || || || | | |||| ||| || ||||||| || ||||
Sbjct 1630240 ATCCTCTAAATGCTCTAACACTTATATTAGATATAGACGAAATTGTCTCGTCACATTCTA 1630181
Query 191 AACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTT 235
|||| ||||| | | |||||| |||||||||||||||||||
Sbjct 1630180 AACCTAGCTCACATATTGTTTTAATAGGCGAACAGCCCAACCCTT 1630136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780727272140
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