Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12]
9,615 sequences; 496,032,534 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq9615 273 5e-71
seq414 273 5e-71
seq223 273 5e-71
seq7 273 5e-71
seq119 214 4e-53
seq1971 156 1e-35
seq274 149 2e-33
seq24 95.1 3e-17
seq218 77.0 8e-12
>seq9615
Length=156766
Score = 273 bits (302), Expect = 5e-71
Identities = 305/405 (75%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|| ||| |||| ||||||||| |||||||||||||||||||||| ||| || |||
Sbjct 102587 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGC 102646
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || ||||||| | || |||
Sbjct 102647 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 102706
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||||| ||| |||| | | |||||||
Sbjct 102707 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTGCCAAGCTGGAGTACGGTAGGGGCA 102766
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| |||||||||||||||||| || | | |||||||| || |||
Sbjct 102767 GAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGTGAA 102826
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| ||||||| || |||||
Sbjct 102827 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 102886
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363
|||||||| ||||||| ||||||||||||| ||||| || | | | ||| || |
Sbjct 102887 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTGGGCG-CTGTGCGTATCGACCC 102945
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 102946 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 102990
Score = 273 bits (302), Expect = 5e-71
Identities = 305/405 (75%), Gaps = 2/405 (0%)
Strand=Plus/Minus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|| ||| |||| ||||||||| |||||||||||||||||||||| ||| || |||
Sbjct 139069 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGC 139010
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || ||||||| | || |||
Sbjct 139009 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 138950
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||||| ||| |||| | | |||||||
Sbjct 138949 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTGCCAAGCTGGAGTACGGTAGGGGCA 138890
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| |||||||||||||||||| || | | |||||||| || |||
Sbjct 138889 GAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGTGAA 138830
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| ||||||| || |||||
Sbjct 138829 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 138770
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363
|||||||| ||||||| ||||||||||||| ||||| || | | | ||| || |
Sbjct 138769 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTGGGCG-CTGTGCGTATCGACCC 138711
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 138710 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 138666
>seq414
Length=232653
Score = 273 bits (302), Expect = 5e-71
Identities = 305/405 (75%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|| ||| |||| ||||||||| |||||||||||||||||||||| ||| || |||
Sbjct 211162 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGC 211221
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || ||||||| | || |||
Sbjct 211222 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 211281
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||||| ||| |||| | | |||||||
Sbjct 211282 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTGCCAAGCTGGAGTACGGTAGGGGCA 211341
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| |||||||||||||||||| || | | |||||||| || |||
Sbjct 211342 GAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGTGAA 211401
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| ||||||| || |||||
Sbjct 211402 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 211461
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363
|||||||| ||||||| ||||||||||||| ||||| || | | | ||| || |
Sbjct 211462 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTGGGCG-CTGTGCGTATCGACCC 211520
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 211521 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 211565
>seq223
Length=428319
Score = 273 bits (302), Expect = 5e-71
Identities = 305/405 (75%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|| ||| |||| ||||||||| |||||| ||||||||||||||| ||| || |||
Sbjct 77794 TGGGGAATAAGCATCGGCTAACTCTGTGCCAACAGCCGCGGTAATACAGAGGATGCAAGC 77853
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || ||||||| | || |||
Sbjct 77854 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 77913
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||||| ||| |||| | | |||||||
Sbjct 77914 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTGCCAAGCTGGAGTACGGTAGGGGCA 77973
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| || ||| |||||||||||||||||| || | | |||||||| || |||
Sbjct 77974 GAGGGAATTTCTGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGTGAA 78033
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| ||||||| || |||||
Sbjct 78034 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 78093
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363
|||||||| ||||||| ||||||||||||| ||||| || | | | ||| || |
Sbjct 78094 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTGGGCG-CTGTGCGTATCGACCC 78152
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 78153 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 78197
>seq7
Length=3634883
Score = 273 bits (302), Expect = 5e-71
Identities = 305/405 (75%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|| ||| |||| ||||||||| |||||||||||||||||||||| ||| || |||
Sbjct 3423037 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGC 3423096
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || ||||||| | || |||
Sbjct 3423097 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 3423156
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||||| ||| |||| | | |||||||
Sbjct 3423157 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTGCCAAGCTGGAGTACGGTAGGGGCA 3423216
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| |||||||||||||||||| || | | |||||||| || |||
Sbjct 3423217 GAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGTGAA 3423276
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| ||||||| || |||||
Sbjct 3423277 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATT 3423336
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363
|||||||| ||||||| ||||||||||||| ||||| || | | | ||| || |
Sbjct 3423337 AGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTGGGCG-CTGTGCGTATCGACCC 3423395
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 3423396 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 3423440
>seq119
Length=756297
Score = 214 bits (236), Expect = 4e-53
Identities = 255/343 (74%), Gaps = 16/343 (5%)
Strand=Plus/Minus
Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 61
||| ||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||
Sbjct 734081 ACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCA 734022
Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121
|| || | |||||| ||||||||||||||| |||||| ||| | || | | ||
Sbjct 734021 AGTCTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTG-----AATCGG-GTTG 733968
Query 122 AAAGGCTATGGCTC----AACCCCGGGACTGCTTTTGAAAC---TGCAGGGCTAGAGTGC 174
|||| | | | | | ||| ||| |||| | ||||| | || || |||||
Sbjct 733967 AAAGTCAAAGTCGCCAAAAACTGGCGGAATGCTCTCGAAACCAATTCA---CTTGAGTGA 733911
Query 175 AGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACAC 234
|| || ||||||||| | |||||| |||||||| || |||| | | |||||| |
Sbjct 733910 GACAGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGC 733851
Query 235 CAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGC 294
|| |||||||| ||| |||| || ||| ||| || ||||||| ||||||||
Sbjct 733850 CAAAAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGC 733791
Query 295 AAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337
||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 733790 GAACGGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGA 733748
>seq1971
Length=31893
Score = 156 bits (172), Expect = 1e-35
Identities = 187/254 (74%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 20 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTAC 79
|||||||| |||||| |||||||||||||| ||| | ||||||||||||||| |
Sbjct 17857 GGCTAACTCTGTGCCAATAGCCGCGGTAATACAGAGGATGTAAGCGTTATCCGGAATGAT 17798
Query 80 TGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACC 139
||||||| ||| || ||||||| || ||||||| | || ||| ||| |||||||||
Sbjct 17797 TGGGCGTGAAGCGTCTATAGGTGGCTTTTTAAGTCCGCCGTCAAATCCTAAGGCTCAACC 17738
Query 140 CCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGT 199
| || || | |||| ||| |||||||| || ||||| | |||||| ||
Sbjct 17737 CTGGTTAGGCGGTGGAAATTGCCAAGCTAGAGTATAGTAGGGGTAGAGGGAATTTACGGT 17678
Query 200 GTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259
| || ||||||||||||||| || || | |||||||| || ||| || ||||| | |
Sbjct 17677 GGAGAGGTGAAATGCGTAGAGATCAGAAAGAACACCAACGGTGAAAGCACTTTGCTAGGC 17618
Query 260 TGTAACTGACACTG 273
| ||||||||||
Sbjct 17617 CGACACTGACACTG 17604
>seq274
Length=346057
Score = 149 bits (164), Expect = 2e-33
Identities = 240/345 (70%), Gaps = 0/345 (0%)
Strand=Plus/Minus
Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60
|| ||| ||| |||| | |||||| || |||||| | ||||||||| || |
Sbjct 103724 TATTTGGGGAATAAGCATCAACTAACTCTATGTCAGCAGTCACGGTAATACAGAGTATAC 103665
Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120
| |||||||| ||| | |||| |||||| | ||||| || || ||||||| | |
Sbjct 103664 AAACGTTATCCAAAATGATTGGGTGTAAAGTATCTGTAGGAGGCTTTTTAAGTCTGCAAT 103605
Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180
||| | ||||||| || || ||| | |||||| | ||| |||| | | |
Sbjct 103604 CAAATCTCAAGGCTCAAACCTGGACAGGCTATGGAAACTACCAAGCTGGAGTATGGTATG 103545
Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240
||||| |||||| || ||| |||||||||||| || | ||||| | |||||||| | |
Sbjct 103544 GGCAAAGGGAATTTCTGGTGGAGCGGTGAAATGAATAAAGATTAGAAAGAACACCAATAG 103485
Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300
||| || ||| ||| | | || |||||||||| | ||||| | |||| ||
Sbjct 103484 TGAAAGCATTTTGATGGGCCGAAATTGACACTGAGAGACCAAAGCTAAGAGAGCGAATGA 103425
Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345
||||||||| || |||||||| ||| ||||| ||| ||||| ||
Sbjct 103424 GATTAGATATCCCAGTAGTCCAAGCCATAAACAATGGATACTGGG 103380
>seq24
Length=2044711
Score = 95.1 bits (104), Expect = 3e-17
Identities = 127/174 (73%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 41 CGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGG 100
||||||||||| ||| || ||| ||||| |||| | ||||||||||| || |||||
Sbjct 286468 CGCGGTAATACAGAGGATGCAAGCATTATCTAGAATGATTGGGCGTAAAGAGTTTGTAGG 286409
Query 101 TGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACTGCT-TTTGAAACT 159
||| || ||||||| || ||| | |||||| || ||| |||| | | | |||||
Sbjct 286408 TGGCTTTTTAAGTCCACCGTCAAATCCCATGGCTTAA-CCCTGGACGGGTGGTGGAAACG 286350
Query 160 GCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATG 213
|| |||||||| | | | ||||| |||||| || || |||| |||||||
Sbjct 286349 GCCAAGCTAGAGTACGGTATGGGCAGAGGGAATTTCTGATGGAGCGATGAAATG 286296
>seq218
Length=447883
Score = 77.0 bits (84), Expect = 8e-12
Identities = 93/127 (73%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 96 GTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGA 155
|||||||| || ||||||| | || ||| | | |||||||||| || || | ||
Sbjct 203293 GTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGA 203352
Query 156 AACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCG 215
|||||| ||| |||| | | ||||||| |||||| | ||| ||||||||||||||
Sbjct 203353 AACTGCCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCG 203412
Query 216 TAGATAT 222
||| ||
Sbjct 203413 AAGAGAT 203419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203084312320
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