Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12]
9,615 sequences; 496,032,534 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq7 205 3e-50
seq9615 203 1e-49
seq119 185 3e-44
seq362 131 6e-28
seq5319 107 7e-21
seq1800 107 7e-21
seq1309 107 7e-21
seq348 105 2e-20
seq218 93.3 1e-16
seq450 89.7 2e-15
seq286 87.8 6e-15
seq20 75.2 4e-11
>seq7
Length=3634883
Score = 205 bits (226), Expect = 3e-50
Identities = 391/567 (69%), Gaps = 17/567 (3%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || |||| |||||||||||||||| ||| || ||||| | || ||
Sbjct 3428884 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 3428825
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|| | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 3428824 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 3428766
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177
||||| | ||| | |||||||| || || || || |||||||||| ||
Sbjct 3428765 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 3428706
Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237
| | ||||||||||| ||| ||| ||| || | | || | | || |
Sbjct 3428705 TAGCTCTTCCAGAGTGGTATCTCACTGACGGCTCGGACCCCCCCCGAAGGGGCTCTTCTT 3428646
Query 238 AGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295
| || ||||||| || | || || || | || |||||| ||| | | |||||||
Sbjct 3428645 CGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTGAAG 3428588
Query 296 GTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354
| | |||||||| |||| | || | | ||||||| || | | ||||
Sbjct 3428587 CTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTT 3428528
Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAAC 413
||||| |||| | ||||||| | || |||||||||| ||||||| |||||||||
Sbjct 3428527 CACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAAC 3428469
Query 414 TTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGG 473
||||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||
Sbjct 3428468 TTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGG 3428409
Query 474 GGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCA 533
|||||| | ||| ||| || || | | |||| | ||| |||||||
Sbjct 3428408 GGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCG 3428355
Query 534 GCACCGGGCAGGCGTCAGTCCGTATAC 560
|||| ||||||||||||| || ||||
Sbjct 3428354 GCACTGGGCAGGCGTCAGCCCCCATAC 3428328
Score = 116 bits (128), Expect = 1e-23
Identities = 126/166 (76%), Gaps = 6/166 (4%)
Strand=Plus/Minus
Query 389 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGT 448
||||||| ||| | | ||| |||||||||| ||||||||||||||||||||||||| ||
Sbjct 3523909 TTACGCCTTTCATACGGGTTGGAACTTACCTGACAAGGAATTTCGCTACCTTAGGACCGT 3523850
Query 449 TATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGT 508
||||||||| ||||| ||| | ||||||||| || || ||| || || |
Sbjct 3523849 TATAGTTACGACCGCGGTTCATTGGGGCTTCGGTT-GTCGGCTC-----CCCTGTCATCA 3523796
Query 509 GCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCC 554
| |||| | ||| |||||||||||| |||||||| |||| ||
Sbjct 3523795 GGTCACCAACTTCCTTGACCTTCCAGCACTGGGCAGGCATCAGCCC 3523750
>seq9615
Length=156766
Score = 203 bits (224), Expect = 1e-49
Identities = 393/568 (69%), Gaps = 19/568 (3%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || |||| |||||||||||||||| ||| || ||||| | || ||
Sbjct 108434 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 108375
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|| | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 108374 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 108316
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177
||||| | ||| | |||||||| || || || || |||||||||| ||
Sbjct 108315 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 108256
Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCC-ACAACCACTAGCGTGGCCGCATCA 236
| | ||||||||||| ||| ||| ||| || || | | || | | ||
Sbjct 108255 TAGCTCTTCCAGAGTGGTATCTCACTGACGGCTCGGACCCCCCCCGAAGGGGGC-CTTCT 108197
Query 237 TAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGAA 294
| | || ||||||| || | || || || | || |||||| ||| | | ||||||
Sbjct 108196 TCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTGAA 108139
Query 295 GGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATT 353
| | | |||||||| |||| | || | | ||||||| || | | |||
Sbjct 108138 GCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATT 108079
Query 354 TCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAA 412
|||||| |||| | ||||||| | || |||||||||| ||||||| ||||||||
Sbjct 108078 TCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAA 108020
Query 413 CTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTG 472
|||||||||||||||||||||||||||||||| ||||||||||| |||||||| || |
Sbjct 108019 CTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCG 107960
Query 473 GGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCC 532
||||||| | ||| ||| || || | | |||| | ||| |||||||
Sbjct 107959 GGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTTCC 107906
Query 533 AGCACCGGGCAGGCGTCAGTCCGTATAC 560
|||| ||||||||||||| || ||||
Sbjct 107905 GGCACTGGGCAGGCGTCAGCCCCCATAC 107878
Score = 203 bits (224), Expect = 1e-49
Identities = 393/568 (69%), Gaps = 19/568 (3%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || |||| |||||||||||||||| ||| || ||||| | || ||
Sbjct 133222 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 133281
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|| | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 133282 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 133340
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177
||||| | ||| | |||||||| || || || || |||||||||| ||
Sbjct 133341 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 133400
Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCC-ACAACCACTAGCGTGGCCGCATCA 236
| | ||||||||||| ||| ||| ||| || || | | || | | ||
Sbjct 133401 TAGCTCTTCCAGAGTGGTATCTCACTGACGGCTCGGACCCCCCCCGAAGGGGGC-CTTCT 133459
Query 237 TAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGAA 294
| | || ||||||| || | || || || | || |||||| ||| | | ||||||
Sbjct 133460 TCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTGAA 133517
Query 295 GGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATT 353
| | | |||||||| |||| | || | | ||||||| || | | |||
Sbjct 133518 GCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATT 133577
Query 354 TCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAA 412
|||||| |||| | ||||||| | || |||||||||| ||||||| ||||||||
Sbjct 133578 TCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAA 133636
Query 413 CTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTG 472
|||||||||||||||||||||||||||||||| ||||||||||| |||||||| || |
Sbjct 133637 CTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCG 133696
Query 473 GGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCC 532
||||||| | ||| ||| || || | | |||| | ||| |||||||
Sbjct 133697 GGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTTCC 133750
Query 533 AGCACCGGGCAGGCGTCAGTCCGTATAC 560
|||| ||||||||||||| || ||||
Sbjct 133751 GGCACTGGGCAGGCGTCAGCCCCCATAC 133778
>seq119
Length=756297
Score = 185 bits (204), Expect = 3e-44
Identities = 292/414 (71%), Gaps = 22/414 (5%)
Strand=Plus/Plus
Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135
||||| | | |||||||||| ||| ||||| || ||||||||| |||||||||||||
Sbjct 477102 ACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAGATAAACTACCCACCT 477160
Query 136 GGCACTGTCCC---CAACCCAGATCATGGG--CCAAGGTTAGATATCCACTACGGTCAGA 190
||| |||||| | ||| || | || | |||||| |||| | |||
Sbjct 477161 CGCAGTGTCCCGCCCCCCCCGAATTTTCGGTGCGGCGGTTAGGCATCCTTAGACGAAAGA 477220
Query 191 GTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTA 250
||||| ||||| | | || | | ||| | || | |||||||||
Sbjct 477221 GTGGTCTTTCAGGATTGG-TCG--------TTGTGTGTCACCACC------TCCCACCTA 477265
Query 251 TCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTT 309
||||||||| | | || || | | |||||||||| ||||| | |||||||||
Sbjct 477266 TCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTTAAGGTGCACGGGGTCTTA 477325
Query 310 TCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369
|||| |||| | | ||||||| || | | ||||||||||||| | ||
Sbjct 477326 CCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTC 477385
Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 429
|||||||| ||| ||||||||| |||||||||||||||| ||||| |||||||||||
Sbjct 477386 GGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAAT 477445
Query 430 TTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483
||||||||||||||| |||| |||||| ||||||||||| |||||||| |||
Sbjct 477446 TTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATT 477499
>seq362
Length=270902
Score = 131 bits (144), Expect = 6e-28
Identities = 176/244 (72%), Gaps = 1/244 (0%)
Strand=Plus/Minus
Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300
||||||||||||||||||| | | || || | | |||||||||| ||||| |
Sbjct 249904 CTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTTAAGGTGCA 249845
Query 301 -GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359
|||||||| | || | | | | |||||| || | | |||||||||||
Sbjct 249844 TGGGGTCTTAACATCTAGTTGTTAGTACTCCACATCTTCACGGAGAATTCAATTTCACCG 249785
Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419
|| | || |||||||| ||| | ||||||| | ||| || |||||| ||||| |
Sbjct 249784 GGTCCATGTCGGAGACAGCGGGGCAATCGTTACACACTTCATGGAGGTCGCTACTTATGC 249725
Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479
|||||||||||||||||||||||| |||| |||||| || || ||||||||||||||
Sbjct 249724 AACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCACCATTTACTGGGGCTTC 249665
Query 480 AATT 483
|||
Sbjct 249664 CATT 249661
>seq5319
Length=4086
Score = 107 bits (118), Expect = 7e-21
Identities = 80/94 (85%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
|| ||||||| || || |||||||||||||||||||||||||||||| ||||||||||
Sbjct 2037 TCATTACGCCTTTTATGGAGGTCGGAACTTACCCGACAAGGAATTTCGATACCTTAGGAC 1978
Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479
||||||||||| |||| ||| || |||||||
Sbjct 1977 CGTTATAGTTACGACCGTTGTTCACCAGGGCTTC 1944
>seq1800
Length=36583
Score = 107 bits (118), Expect = 7e-21
Identities = 80/94 (85%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
|||||||||| || | |||||||||||||||||||||||||||||| ||||||||||
Sbjct 6418 TCGTTACGCCTTTTATTGAGGTCGGAACTTACCCGACAAGGAATTTCGATACCTTAGGAC 6477
Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479
||||||||||| |||| ||| || |||||||
Sbjct 6478 CGTTATAGTTACGACCGTTGTTCACCAGGGCTTC 6511
>seq1309
Length=56175
Score = 107 bits (118), Expect = 7e-21
Identities = 80/94 (85%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
|| ||||||| || || |||||||||||||||||||||||||||||| ||||||||||
Sbjct 47236 TCATTACGCCTTTTATGGAGGTCGGAACTTACCCGACAAGGAATTTCGATACCTTAGGAC 47295
Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479
||||||||||| |||| ||| || |||||||
Sbjct 47296 CGTTATAGTTACGACCGTTGTTCACCAGGGCTTC 47329
>seq348
Length=280399
Score = 105 bits (116), Expect = 2e-20
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
|||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 47526 TCGTTACGCCTTTCATGCGGGTCGGAACTTACCCTACAAGGAATTTCGCTACCTTAGGAC 47585
Query 446 GGTTATAGTTACC 458
||||||||||||
Sbjct 47586 CGTTATAGTTACC 47598
>seq218
Length=447883
Score = 93.3 bits (102), Expect = 1e-16
Identities = 63/71 (89%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
|| |||| || || |||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 56865 TCATTACACCTTTTGTGCGGGTCAGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 56924
Query 446 GGTTATAGTTA 456
|||||||||
Sbjct 56925 CATTATAGTTA 56935
>seq450
Length=213072
Score = 89.7 bits (98), Expect = 2e-15
Identities = 78/97 (80%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
|| ||| ||| ||| ||| |||||||||||||||||||||||||| | ||| || ||
Sbjct 111641 TCATTATGCCTTTCATGCGAATCGGAACTTACCCGACAAGGAATTTCACAACCATAAGAC 111700
Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAAT 482
||||||||||| |||| || ||| ||||||||||
Sbjct 111701 CGTTATAGTTACGGTCGCCTTTCACTAGGGCTTCAAT 111737
>seq286
Length=334870
Score = 87.8 bits (96), Expect = 6e-15
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
|| |||| || || |||| |||| |||||||||||||||||||||||||| |||||||||
Sbjct 270721 TCATTACACCTTTTGTGCGGGTCAGAACTTACCCGACAAGGAATTTCGCTGCCTTAGGAT 270780
Query 446 GGTTATAGTTA 456
|||||||||
Sbjct 270781 CATTATAGTTA 270791
>seq20
Length=2140714
Score = 75.2 bits (82), Expect = 4e-11
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444
|||||| ||| || ||||||||| ||||||| |||||| |||||||||||||||||||
Sbjct 788815 TCGTTAGGCCTTTTGTGCAGGTCAGAACTTAATCGACAACGAATTTCGCTACCTTAGGA 788757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702236314240
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