Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Populus_20euphratica_20[refseq_20GCF_5F000495115.1_202014-08-12] 9,615 sequences; 496,032,534 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq7 205 3e-50 seq9615 203 1e-49 seq119 185 3e-44 seq362 131 6e-28 seq5319 107 7e-21 seq1800 107 7e-21 seq1309 107 7e-21 seq348 105 2e-20 seq218 93.3 1e-16 seq450 89.7 2e-15 seq286 87.8 6e-15 seq20 75.2 4e-11 >seq7 Length=3634883 Score = 205 bits (226), Expect = 3e-50 Identities = 391/567 (69%), Gaps = 17/567 (3%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 3428884 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 3428825 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 3428824 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 3428766 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || || || |||||||||| || Sbjct 3428765 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 3428706 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237 | | ||||||||||| ||| ||| ||| || | | || | | || | Sbjct 3428705 TAGCTCTTCCAGAGTGGTATCTCACTGACGGCTCGGACCCCCCCCGAAGGGGCTCTTCTT 3428646 Query 238 AGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295 | || ||||||| || | || || || | || |||||| ||| | | ||||||| Sbjct 3428645 CGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTGAAG 3428588 Query 296 GTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354 | | |||||||| |||| | || | | ||||||| || | | |||| Sbjct 3428587 CTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTT 3428528 Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAAC 413 ||||| |||| | ||||||| | || |||||||||| ||||||| ||||||||| Sbjct 3428527 CACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAAC 3428469 Query 414 TTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGG 473 ||||||||||||||||||||||||||||||| ||||||||||| |||||||| || || Sbjct 3428468 TTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGG 3428409 Query 474 GGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCA 533 |||||| | ||| ||| || || | | |||| | ||| ||||||| Sbjct 3428408 GGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCG 3428355 Query 534 GCACCGGGCAGGCGTCAGTCCGTATAC 560 |||| ||||||||||||| || |||| Sbjct 3428354 GCACTGGGCAGGCGTCAGCCCCCATAC 3428328 Score = 116 bits (128), Expect = 1e-23 Identities = 126/166 (76%), Gaps = 6/166 (4%) Strand=Plus/Minus Query 389 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGT 448 ||||||| ||| | | ||| |||||||||| ||||||||||||||||||||||||| || Sbjct 3523909 TTACGCCTTTCATACGGGTTGGAACTTACCTGACAAGGAATTTCGCTACCTTAGGACCGT 3523850 Query 449 TATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGT 508 ||||||||| ||||| ||| | ||||||||| || || ||| || || | Sbjct 3523849 TATAGTTACGACCGCGGTTCATTGGGGCTTCGGTT-GTCGGCTC-----CCCTGTCATCA 3523796 Query 509 GCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCC 554 | |||| | ||| |||||||||||| |||||||| |||| || Sbjct 3523795 GGTCACCAACTTCCTTGACCTTCCAGCACTGGGCAGGCATCAGCCC 3523750 >seq9615 Length=156766 Score = 203 bits (224), Expect = 1e-49 Identities = 393/568 (69%), Gaps = 19/568 (3%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 108434 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 108375 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 108374 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 108316 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || || || |||||||||| || Sbjct 108315 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 108256 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCC-ACAACCACTAGCGTGGCCGCATCA 236 | | ||||||||||| ||| ||| ||| || || | | || | | || Sbjct 108255 TAGCTCTTCCAGAGTGGTATCTCACTGACGGCTCGGACCCCCCCCGAAGGGGGC-CTTCT 108197 Query 237 TAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGAA 294 | | || ||||||| || | || || || | || |||||| ||| | | |||||| Sbjct 108196 TCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTGAA 108139 Query 295 GGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATT 353 | | | |||||||| |||| | || | | ||||||| || | | ||| Sbjct 108138 GCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATT 108079 Query 354 TCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAA 412 |||||| |||| | ||||||| | || |||||||||| ||||||| |||||||| Sbjct 108078 TCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAA 108020 Query 413 CTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTG 472 |||||||||||||||||||||||||||||||| ||||||||||| |||||||| || | Sbjct 108019 CTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCG 107960 Query 473 GGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCC 532 ||||||| | ||| ||| || || | | |||| | ||| ||||||| Sbjct 107959 GGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTTCC 107906 Query 533 AGCACCGGGCAGGCGTCAGTCCGTATAC 560 |||| ||||||||||||| || |||| Sbjct 107905 GGCACTGGGCAGGCGTCAGCCCCCATAC 107878 Score = 203 bits (224), Expect = 1e-49 Identities = 393/568 (69%), Gaps = 19/568 (3%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 133222 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 133281 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 133282 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 133340 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || || || |||||||||| || Sbjct 133341 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 133400 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCC-ACAACCACTAGCGTGGCCGCATCA 236 | | ||||||||||| ||| ||| ||| || || | | || | | || Sbjct 133401 TAGCTCTTCCAGAGTGGTATCTCACTGACGGCTCGGACCCCCCCCGAAGGGGGC-CTTCT 133459 Query 237 TAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGAA 294 | | || ||||||| || | || || || | || |||||| ||| | | |||||| Sbjct 133460 TCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTGAA 133517 Query 295 GGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATT 353 | | | |||||||| |||| | || | | ||||||| || | | ||| Sbjct 133518 GCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATT 133577 Query 354 TCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAA 412 |||||| |||| | ||||||| | || |||||||||| ||||||| |||||||| Sbjct 133578 TCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAA 133636 Query 413 CTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTG 472 |||||||||||||||||||||||||||||||| ||||||||||| |||||||| || | Sbjct 133637 CTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCG 133696 Query 473 GGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCC 532 ||||||| | ||| ||| || || | | |||| | ||| ||||||| Sbjct 133697 GGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTTCC 133750 Query 533 AGCACCGGGCAGGCGTCAGTCCGTATAC 560 |||| ||||||||||||| || |||| Sbjct 133751 GGCACTGGGCAGGCGTCAGCCCCCATAC 133778 >seq119 Length=756297 Score = 185 bits (204), Expect = 3e-44 Identities = 292/414 (71%), Gaps = 22/414 (5%) Strand=Plus/Plus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||| | | |||||||||| ||| ||||| || ||||||||| ||||||||||||| Sbjct 477102 ACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAGATAAACTACCCACCT 477160 Query 136 GGCACTGTCCC---CAACCCAGATCATGGG--CCAAGGTTAGATATCCACTACGGTCAGA 190 ||| |||||| | ||| || | || | |||||| |||| | ||| Sbjct 477161 CGCAGTGTCCCGCCCCCCCCGAATTTTCGGTGCGGCGGTTAGGCATCCTTAGACGAAAGA 477220 Query 191 GTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTA 250 ||||| ||||| | | || | | ||| | || | ||||||||| Sbjct 477221 GTGGTCTTTCAGGATTGG-TCG--------TTGTGTGTCACCACC------TCCCACCTA 477265 Query 251 TCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTT 309 ||||||||| | | || || | | |||||||||| ||||| | ||||||||| Sbjct 477266 TCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTTAAGGTGCACGGGGTCTTA 477325 Query 310 TCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 |||| |||| | | ||||||| || | | ||||||||||||| | || Sbjct 477326 CCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTC 477385 Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 429 |||||||| ||| ||||||||| |||||||||||||||| ||||| ||||||||||| Sbjct 477386 GGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAAT 477445 Query 430 TTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||||||||||||||| |||| |||||| ||||||||||| |||||||| ||| Sbjct 477446 TTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATT 477499 >seq362 Length=270902 Score = 131 bits (144), Expect = 6e-28 Identities = 176/244 (72%), Gaps = 1/244 (0%) Strand=Plus/Minus Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 ||||||||||||||||||| | | || || | | |||||||||| ||||| | Sbjct 249904 CTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTTAAGGTGCA 249845 Query 301 -GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||| | || | | | | |||||| || | | ||||||||||| Sbjct 249844 TGGGGTCTTAACATCTAGTTGTTAGTACTCCACATCTTCACGGAGAATTCAATTTCACCG 249785 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 || | || |||||||| ||| | ||||||| | ||| || |||||| ||||| | Sbjct 249784 GGTCCATGTCGGAGACAGCGGGGCAATCGTTACACACTTCATGGAGGTCGCTACTTATGC 249725 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 |||||||||||||||||||||||| |||| |||||| || || |||||||||||||| Sbjct 249724 AACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCACCATTTACTGGGGCTTC 249665 Query 480 AATT 483 ||| Sbjct 249664 CATT 249661 >seq5319 Length=4086 Score = 107 bits (118), Expect = 7e-21 Identities = 80/94 (85%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || ||||||| || || |||||||||||||||||||||||||||||| |||||||||| Sbjct 2037 TCATTACGCCTTTTATGGAGGTCGGAACTTACCCGACAAGGAATTTCGATACCTTAGGAC 1978 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||| |||| ||| || ||||||| Sbjct 1977 CGTTATAGTTACGACCGTTGTTCACCAGGGCTTC 1944 >seq1800 Length=36583 Score = 107 bits (118), Expect = 7e-21 Identities = 80/94 (85%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| || | |||||||||||||||||||||||||||||| |||||||||| Sbjct 6418 TCGTTACGCCTTTTATTGAGGTCGGAACTTACCCGACAAGGAATTTCGATACCTTAGGAC 6477 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||| |||| ||| || ||||||| Sbjct 6478 CGTTATAGTTACGACCGTTGTTCACCAGGGCTTC 6511 >seq1309 Length=56175 Score = 107 bits (118), Expect = 7e-21 Identities = 80/94 (85%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || ||||||| || || |||||||||||||||||||||||||||||| |||||||||| Sbjct 47236 TCATTACGCCTTTTATGGAGGTCGGAACTTACCCGACAAGGAATTTCGATACCTTAGGAC 47295 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||| |||| ||| || ||||||| Sbjct 47296 CGTTATAGTTACGACCGTTGTTCACCAGGGCTTC 47329 >seq348 Length=280399 Score = 105 bits (116), Expect = 2e-20 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||| Sbjct 47526 TCGTTACGCCTTTCATGCGGGTCGGAACTTACCCTACAAGGAATTTCGCTACCTTAGGAC 47585 Query 446 GGTTATAGTTACC 458 |||||||||||| Sbjct 47586 CGTTATAGTTACC 47598 >seq218 Length=447883 Score = 93.3 bits (102), Expect = 1e-16 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || |||| || || |||| |||| |||||||||||||||||||||||||||||||||||| Sbjct 56865 TCATTACACCTTTTGTGCGGGTCAGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 56924 Query 446 GGTTATAGTTA 456 ||||||||| Sbjct 56925 CATTATAGTTA 56935 >seq450 Length=213072 Score = 89.7 bits (98), Expect = 2e-15 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || ||| ||| ||| ||| |||||||||||||||||||||||||| | ||| || || Sbjct 111641 TCATTATGCCTTTCATGCGAATCGGAACTTACCCGACAAGGAATTTCACAACCATAAGAC 111700 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAAT 482 ||||||||||| |||| || ||| |||||||||| Sbjct 111701 CGTTATAGTTACGGTCGCCTTTCACTAGGGCTTCAAT 111737 >seq286 Length=334870 Score = 87.8 bits (96), Expect = 6e-15 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || |||| || || |||| |||| |||||||||||||||||||||||||| ||||||||| Sbjct 270721 TCATTACACCTTTTGTGCGGGTCAGAACTTACCCGACAAGGAATTTCGCTGCCTTAGGAT 270780 Query 446 GGTTATAGTTA 456 ||||||||| Sbjct 270781 CATTATAGTTA 270791 >seq20 Length=2140714 Score = 75.2 bits (82), Expect = 4e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444 |||||| ||| || ||||||||| ||||||| |||||| ||||||||||||||||||| Sbjct 788815 TCGTTAGGCCTTTTGTGCAGGTCAGAACTTAATCGACAACGAATTTCGCTACCTTAGGA 788757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702236314240