Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq3376 197 8e-49 seq1385 129 3e-28 seq73 107 1e-21 >seq3376 Length=3804 Score = 197 bits (218), Expect = 8e-49 Identities = 114/117 (97%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 557 GAACCCAAAGACTTTGATTTCTCGTGAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 616 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 617 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 673 >seq1385 Length=128055 Score = 129 bits (142), Expect = 3e-28 Identities = 103/119 (87%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGT-CAAAATGATAACATCGC 58 ||||||||| ||||||||||||| ||||||||| ||| |||| | |||| ||||||| Sbjct 36949 GAACCCAAAAACTTTGATTTCTCATAAGGTGCC-AGCAGAGTCCTTAATG-TAACATCTG 37006 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 37007 CTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 37065 >seq73 Length=736034 Score = 107 bits (118), Expect = 1e-21 Identities = 97/117 (83%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGT-CAAAATGATAACATCGC 58 ||||||||| ||||||||||||| ||||||||| ||| |||| | |||| ||||||| Sbjct 620561 GAACCCAAAAACTTTGATTTCTCATAAGGTGCC-AGCAGAGTCCTTAATG-TAACATCTG 620618 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 | ||||||| |||||||| |||| |||| |||||| |||||||| | ||| ||||| Sbjct 620619 CTGATCCCTGGTCGGCATCATTTATGGTTGAGACTAGGACGGTATTTAATCATCTTC 620675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278377146840