Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Primula_20veris_20[genbank_20GCA_5F000788445.1_202014-12-03] 8,756 sequences; 309,692,940 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq232 100 4e-16 >seq232 Length=163650 Score = 100 bits (110), Expect = 4e-16 Identities = 196/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 162580 AACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACGAAAGC 162639 |||||| | || ||| | |||| |||| | | ||| || || |||||||| || Sbjct 146877 AACTACCGTGAGGCCTACGGCATATATGCGTGCAACGGCATCCTGTTCAATCATGAGTCG 146818 Query 162640 TCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAATTAGT 162699 |||| | || |||| || || || || |||||| ||| || | || || | Sbjct 146817 CCACGTCGTGGTGAGAACTTTGTGACCCGTAAGATCACCCGTGCAGTTGGTCGGATCAAG 146758 Query 162700 GTGGGACTCCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGGGACAC 162759 | || || || || | ||| ||||| ||| | | ||| | | |||||||| | Sbjct 146757 ATAGGCCTACAGAGCAAGCTATTCCTTGGGAACTTACAGGCCTCAAGAGACTGGGGTTTC 146698 Query 162760 GCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATGATTAT 162819 ||| |||||| || ||||| |||||| ||||||| || || || ||||| ||||||||| Sbjct 146697 GCCGGAGACTATGTTGAGGCCATGTGGATGATGCTCCAACAGGAAAAGCCCGATGATTAT 146638 Query 162820 GTGATCGCAACTGGTGAGCAGTATTCTGTAAAGGACTTTGTTAATGCTGC 162869 ||| |||| |||| ||| || |||| |||| ||| | | ||||| Sbjct 146637 GTGGTCGCCACTGAGGAGTCCCATACTGTTCAGGAATTTCTAGAGGCTGC 146588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691383519790560