Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1275 131 9e-29 seq93 113 3e-23 seq4383 111 9e-23 >seq1275 Length=234140 Score = 131 bits (144), Expect = 9e-29 Identities = 99/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || ||||||| || Sbjct 166581 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCC 166640 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||| ||||||||||||| Sbjct 166641 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATTTGATCGTCTTCGA 166697 >seq93 Length=380271 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||| ||||| ||||||||||||| ||||||| || ||||| || ||||||| | Sbjct 287726 GAATCCAAAAACTTTGATTTCTCATAAGGTGTCGGTGGAGTCCTAAAAGTAACATCCGCG 287667 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| || |||||||| ||||| |||| |||||| |||| ||||||||||||||||| Sbjct 287666 GATCTCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGATATCTGATCGTCTTCGA 287610 >seq4383 Length=29509 Score = 111 bits (122), Expect = 9e-23 Identities = 96/118 (81%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGT-GCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||| |||| ||||| || ||||||| | Sbjct 3181 GAACCCAAAAACTTTGATTTCTCATAAGGTTGCCGGCAGAGTCCTAAAAGTAACATCTGC 3122 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 3121 TAATCCTTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 3064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278373513720