Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1729 78.8 2e-12 seq220 75.2 2e-11 >seq1729 Length=289159 Score = 78.8 bits (86), Expect = 2e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 99 AAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 ||||||||||||||||||| |||||||||||||| ||||||| || || ||||||| Sbjct 68379 AAGGAATTTCGCTACCTTATGACCGTTATAGTTATGGCCGCCATTCACCGGGGCTT 68434 >seq220 Length=908200 Score = 75.2 bits (82), Expect = 2e-11 Identities = 91/122 (75%), Gaps = 9/122 (7%) Strand=Plus/Plus Query 216 AGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTT 275 ||| || |||||| || | |||||| || | |||||||||||| || |||||||||| Sbjct 852492 AGCCCCCATACATGTTCCTACGACTT-GCGAAGACCTGTGTTTTTAGTGAACAGTCGCTC 852550 Query 276 GGGCCTATTCTCTGCGGCC-----TGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGG 330 |||||| || ||||| || ||| | || |||| ||||||||| ||||| ||| Sbjct 852551 GGGCCTGGTCACTGCGACCCCCTTTGTAAGGGA---GCACTCCTTCTCCCGAAGTTCCGG 852607 Query 331 GG 332 || Sbjct 852608 GG 852609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062292187648