Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq456 372 5e-101 seq708 365 8e-99 seq244 340 3e-91 seq233 315 1e-83 >seq456 Length=775121 Score = 372 bits (412), Expect = 5e-101 Identities = 259/293 (88%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||| ||||||||||||||||| ||||||| Sbjct 383319 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATTAGTAGGGTAAAACTAACATGTCTCA 383377 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| | Sbjct 383378 TAACGGTCTAAACCCAGCTCATGTTCCCTATTAGTGGGTGAACAATCCAACACTTGGTAA 383437 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 383438 ATTTTGCTTCACAATGATAGGAAGAGCCGACATTGAAGGATCAAAAAGCAACGTCGCTAT 383497 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||| |||| |||||| |||||||||||||||||| || ||||||| | Sbjct 383498 GAACGCTTGGCTGCCATAAGCGAGTTATACCTGTGGTAACTTTTCTGACATCTCTAGCTT 383557 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| | | || |||||||||||||||||||| |||||| ||||||||||| Sbjct 383558 CAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTTGTATTC 383610 >seq708 Length=137701 Score = 365 bits (404), Expect = 8e-99 Identities = 252/284 (89%), Gaps = 1/284 (0%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| |||| | | || ||||| || ||| ||||||||||||||||||||||||||| Sbjct 33968 GAATTACTATTGCGAC-ACTGTCATTAGGAGGCTAAAACTAACCTGTCTCATGACGGTCT 33910 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 ||||||| ||||||||||||||| |||||||||||||||||| ||| |||||||||| Sbjct 33909 AAACCCAACTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTAAATTCTGCTT 33850 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 | |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 33849 CATAATGATAGGAAGAGCCGACATCGAAGGATAAAAAAGCAACGTCGCTATGAATGCTTG 33790 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 |||||||||||| |||||||| |||||||||||||||| |||||||||| | ||||| || Sbjct 33789 GCTGCCACAAGCTAGTTATCCTTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCG 33730 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | ||||||||||||||||||| ||||||||||| |||||| Sbjct 33729 AAGATCTAAAGGATCGATAGGCCATGCTTTCATGGTTCGTATTC 33686 >seq244 Length=134009 Score = 340 bits (376), Expect = 3e-91 Identities = 252/293 (86%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || | |||||| |||||||||||||||| |||| Sbjct 67500 TACTAGGTTGAATTACTATTGTGAC-ACTATTATCAGTGGGGTAAAACTAACCTGCCTCA 67442 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||| | ||| || Sbjct 67441 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCATCACTTGGTGA 67382 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| |||||| |||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct 67381 ATTGTGCTTCACAATGATAGGAAGAGCCGACATAGAAGGATATAAAAGCAACGTCGCTAT 67322 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | Sbjct 67321 GAACGCTTGGCTGCCACAAGCCAGTTATCCATGTGGTAACTTTTCTGATACCTCTAGCTT 67262 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| || || ||||| |||| |||||||| ||||||||| | ||| || Sbjct 67261 CAAATTCTGAAGGTCTAAAAGATCATTAGGCCACGCTTTCATGGGTCGTACTC 67209 >seq233 Length=332409 Score = 315 bits (348), Expect = 1e-83 Identities = 229/264 (87%), Gaps = 1/264 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct 188793 GTCATGAGTAGGGTAAAACTAACCTGTCTCACAAGGGTCTAAACCCAGCTCACGTTCCTT 188734 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 ||| | |||||||||||||||| ||| |||||||||||| |||||||||||||||| Sbjct 188733 ATTGGAGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCATAATGATAGGAAGAGCCG 188674 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 ||||| |||||| |||||||||||| ||||||||||||||| |||||||||| |||| || Sbjct 188673 ACATCAAAGGATAAAAAAGCAACGTTGCTATGAACGCTTGGTTGCCACAAGCTAGTTGTC 188614 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 || ||| |||| ||| || |||||||||| |||||||| || || ||| ||||||||| | Sbjct 188613 CCCGTGATAAC-TTTATGACACCTCTAGCTTCAAATTTTGAAGGTCTAGAGGATCGATTG 188555 Query 270 GCCACACTTTCATGGTTTGTATTC 293 |||| |||||| | ||||||||| Sbjct 188554 TCCACGCTTTCACGATTTGTATTC 188531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854313295488