Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1275 75.2 1e-11 seq4383 73.4 5e-11 seq735 73.4 5e-11 >seq1275 Length=234140 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | || ||| | |||| |||||||||||||| | | ||||| Sbjct 166848 CCAACAGAATAGGACCGAAA-TCTTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 166906 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 166907 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 166944 >seq4383 Length=29509 Score = 73.4 bits (80), Expect = 5e-11 Identities = 63/77 (82%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTAA 92 |||||| | |||| |||||||||||||| | | ||||| ||||||||||| ||||||| Sbjct 2927 TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCCTGCTTTGAGTACTCTAA 2868 Query 93 TTTTCTCAAGGTAAAAG 109 ||| |||| |||| || Sbjct 2867 TTTCTTCAAAGTAATAG 2851 >seq735 Length=461690 Score = 73.4 bits (80), Expect = 5e-11 Identities = 63/77 (82%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 34 TCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGTAAGCCTGCTTTGAACACTCTAA 92 |||||| | ||||||||||||||||||| | | || || || |||||||| |||||||| Sbjct 19573 TCCTATGATGTTATTCCATGCTAATGTATCTAGAGCATAGGCTTGCTTTGAGCACTCTAA 19514 Query 93 TTTTCTCAAGGTAAAAG 109 ||| |||| |||| || Sbjct 19513 TTTCTTCAAAGTAATAG 19497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595141486632