Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq120 98.7 2e-18 seq1437 87.8 4e-15 >seq120 Length=204732 Score = 98.7 bits (108), Expect = 2e-18 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 169 GAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAG 228 |||| ||| |||| || | |||| || ||| |||||| ||||| ||||| || | | Sbjct 187684 GAGTACAGTAGGGACAGAGGAAATTTCTCGTGGAGCGGTTAAATGTGTAGAGATCATAAA 187743 Query 229 GAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTG 288 |||||||| ||| || | || || | | |||| |||||||| |||||| | Sbjct 187744 GAACACCAACGGCAAAAGTACTCTGATGAGCCGACACTGTCACTGAGGGATGAAAGCTAG 187803 Query 289 GGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 ||||||||| ||||||||||||| |||||| ||| |||||||||| Sbjct 187804 GGGAGCAAATGGGATTAGATACCCCATTAGTCCTAGCCATAAACGATGA 187852 >seq1437 Length=277482 Score = 87.8 bits (96), Expect = 4e-15 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 |||||||| |||||||| ||||| ||||| | |||||||| || ||||||| | | Sbjct 226591 AGCGTTATTCGGAATTATTGGGCATAAAGCATATGTAGGTGGCTTTTTAAGTCCGCCATC 226532 Query 122 AAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGG 181 ||| | | |||||||||| || | | |||||| | ||| |||| | |||| Sbjct 226531 AAATCCCAGGGCTCAACCCTGGACAGGAGGTGGAAACTACCAAGCTGGAGTAAGGTAGGG 226472 Query 182 GCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGA 219 ||| |||||| | | || ||| |||||||||||||| Sbjct 226471 GCAGAGGGAATTTCCAATGGAGCTGTGAAATGCGTAGA 226434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203077899264