Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq708 574 2e-161 seq244 562 1e-157 seq199 329 1e-87 seq618 266 1e-68 seq1073 131 5e-28 seq456 123 8e-26 seq233 123 8e-26 >seq708 Length=137701 Score = 574 bits (636), Expect = 2e-161 Identities = 449/532 (84%), Gaps = 18/532 (3%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 ||||| || ||| ||||||| ||||||| |||| | |||| ||||||||| |||| Sbjct 33651 TTTTGTTCCACACGAGATTTATGTTCTCGTTGAGCTCATCTTAAGACACCTGCTTTATCT 33592 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 ||||||| ||||||| |||||||||||||||||||||||||||||| || || ||||| Sbjct 33591 TTTAACAAATGTGCCACCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCTAGATCG 33532 Query 128 GCC--CGCGAAG--GACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183 | ||||| | | |||| ||| ||||| | | || ||| |||| Sbjct 33531 TCTTACGCGAGGCTGGCCTTGGGTCCA--AAATGCCCCG------CC---TCCATTTCAC 33483 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 | ||||||||| |||| ||| |||||||||||||| || ||| ||| |||||||| Sbjct 33482 AAAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCAATTTCGCTGAA---GCTCCCAC 33426 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 33425 TTATACTACACCTCTCAAGTCATTTCACAAAGTTGGACTAGAGTCAAGCTCAACAGGGTC 33366 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||||| |||||||| ||||||| ||||||||||| ||||||||| || |||||||| Sbjct 33365 TTCTTTCCCGGCTGATTCTGCCAAGCTCGTTCCCTTGGTTGTGGTTTCACTGGATAGTAG 33306 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 | ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 33305 ACAGGGACAATGGGAATCTCGTTAATCCATTCATGCATGTCACTAATTAGATGACGAGGC 33246 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 ||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||||||||| Sbjct 33245 ATTTGGCTACCTTAAGAGAGTCATAATTACTCCTGCCATTTACTCGCGCTTGGTTGAATT 33186 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||| |||||||||||||||||| || | |||| Sbjct 33185 TCTTCACTTTGACATTCAGAGCATTGGGCAGAAATCACATTGTGTTAGCATC 33134 >seq244 Length=134009 Score = 562 bits (622), Expect = 1e-157 Identities = 447/533 (84%), Gaps = 16/533 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||| ||||||| |||| | |||||| ||| || | ||| Sbjct 67175 CTTTTGTTCCACATGAGATTTTTGTTCTCGTTGAGCTCATCTTAGGGCACATGTGCTATC 67116 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||| ||||||||||| |||||||||||||| || |||| ||| Sbjct 67115 TTTTAACAGATGTGCCGCCCTAGCCAAACTCCTCACCTGACAATGTCTTCCACCCTGATT 67056 Query 127 GGCCCGCG-AAGGAC---CTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCA 182 |||| || |||| | |||| ||| ||| || || || ||| ||| || Sbjct 67055 GGCCGACGCAAGGTCGGCCTTAGGTCCAAAAAGAGG--GGCGATGACT-----CGCCTCC 67003 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 | | |||||||| ||| ||| |||||||||||||| || ||||||| ||||||| Sbjct 67002 GTTA--AAGTAAAATAACTTTAAAAGTAGTGGTATTTCAGTTTCGCCGAA---GCTCCCA 66948 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||| |||||| |||||||||||||||||||||| ||||| ||||||||| |||||||| Sbjct 66947 CTTATACTACACATCTCAAGTCATTTCACAAAGTCTGACTAAAGTCAAGCTTAACAGGGT 66888 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||| ||||||||| |||||||| ||||||||||| |||||| ||||||||||| Sbjct 66887 CTTCTTTCCTCGCTGATTCTACCAAGCCCATTCCCTTGGCTATGGTTTTGCTAGATAGTA 66828 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || |||||||||| | ||||| ||||||||||||||||| |||||||||||||||| ||| Sbjct 66827 GACAGGGACAGTGAGGATCTCATTAATCCATTCATGCGCATCACTAATTAGATGACCAGG 66768 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 ||||||||||| ||||||||||||||||||||| || ||||||||||||||| ||||||| Sbjct 66767 CATTTGGCTACATTAAGAGAGTCATAGTTACTCTCGTCGTTTACCCGCGCTTAGTTGAAT 66708 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||| |||||||||||||||||||||||||||||| | | |||| Sbjct 66707 TTCTTCACTTTGAAATTCAGAGCACTGGGCAGAAATCACATTGCATTAGCATC 66655 >seq199 Length=541073 Score = 329 bits (364), Expect = 1e-87 Identities = 209/227 (92%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 292 CTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTC 351 || |||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||| Sbjct 347685 CTAAACATGGTCTTCTTTCCTCGCTGATTCTGCCAAGCCCGTTCACTTGGCTGTGGTTTC 347626 Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411 || ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||| Sbjct 347625 ACTGGATAGTAGATAAGGACAGTGGGAATCTCTTTAATCCATTCATGCGTGTCACTAATT 347566 Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 471 |||||||||||||||| ||||||||||||||||||||||||||| || ||||||| || Sbjct 347565 AGATGACGAGGCATTTAGCTACCTTAAGAGAGTCATAGTTACTCTTGCTGTTTACCTGCA 347506 Query 472 CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 347505 CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTAGGTAGAAAT 347459 >seq618 Length=268662 Score = 266 bits (294), Expect = 1e-68 Identities = 165/177 (93%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411 ||| |||| |||| ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 73119 GCTGGATAATAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGAGTGTCACTAATT 73060 Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 471 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 73059 AGATGACGAGACATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCATCGTTTACCCGCG 73000 Query 472 CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528 |||| |||||||||||||||||||||||||||||| | || |||||||||||||||| Sbjct 72999 CTTGATTGAATTTCTTCACTTTGACATTCAGAGCATTAGGTAGAAATCACATTGCGT 72943 >seq1073 Length=358613 Score = 131 bits (144), Expect = 5e-28 Identities = 84/92 (91%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||| |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| Sbjct 145718 CTTATACTACACCTCTTAAGTCATTTCATAAAGTCGGATTAGAGTCAAGCTCAACAGGGT 145659 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTT 334 |||||| ||||||||||| |||||||| ||| Sbjct 145658 TTTCTTTTCCCGCTGATTCTGCCAAGCCTGTT 145627 >seq456 Length=775121 Score = 123 bits (136), Expect = 8e-26 Identities = 101/123 (82%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 ||||| ||| || ||||||| ||||||| |||| | ||||||||| ||| ||||| Sbjct 383663 TTTTGTTCTCCACGAGATTTTTGTTCTCATTGAGCTCATCTTAGGACATCTGGGTTATCT 383722 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 |||||||||| || ||||||||||||||||| ||||| ||||||| ||| |||||||| Sbjct 383723 TTTAACAGATATGTCGCCCCAGCCAAACTCCTCACCTAACAATGTTATCCGCCCGGATCA 383782 Query 128 GCC 130 ||| Sbjct 383783 GCC 383785 >seq233 Length=332409 Score = 123 bits (136), Expect = 8e-26 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 10 TTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTT 69 ||| || ||| ||||||| ||||||| | || | ||||| |||| |||||||| || Sbjct 188494 TTGTTCCACACGAGATTTATGTTCTCGTTTAGCTCATCTTAGAACACTTGCGTTATCTTT 188435 Query 70 TAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGC 129 ||||| ||||||||| |||||||||||||||||||||||||||| || |||| |||||| Sbjct 188434 TAACAAATGTGCCGCACCAGCCAAACTCCCCACCTGACAATGTCTTCTACCCAAATCGGC 188375 Query 130 C 130 | Sbjct 188374 C 188374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635034059904