Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq708 82.4 1e-13 seq244 78.8 2e-12 seq456 75.2 2e-11 >seq708 Length=137701 Score = 82.4 bits (90), Expect = 1e-13 Identities = 93/122 (76%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61 ||||||||||| || || ||| | | ||||||| | ||| || ||| || || || Sbjct 33976 TACGAGAGGAATCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCATTG 34033 Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121 | |||||||||||| ||||||||||| ||||||||| ||||||| |||| | || || Sbjct 34034 GCACGAAGCTACCATGCGCTGGATTATGAATGAACGCCTTTAAGTCATAATCTAAGCTAG 34093 Query 122 AA 123 || Sbjct 34094 AA 34095 >seq244 Length=134009 Score = 78.8 bits (86), Expect = 2e-12 Identities = 86/112 (77%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| || ||| | | ||||||| | || | | ||| || |||| Sbjct 67498 GTACGAGAGGAACCATTGA-TTC-GCACAATTGGTCATCGCACTTCTTTGAAAAGCCAGT 67555 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 | ||||||||||||| ||| ||||||| || ||||||||||||| ||||| Sbjct 67556 GGAGCGAAGCTACCATGCGCTAGATTATGACTAAACGCCTCTAAGTTAGAAT 67607 >seq456 Length=775121 Score = 75.2 bits (82), Expect = 2e-11 Identities = 92/123 (75%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||| |||||| || ||| | | ||||||| | | | || ||| || |||| Sbjct 383321 GTACGAGAAGAACCGTTGA-TTC-GTACAATTGGTCATCGTGCTTGGTTGAAAAGTCAGT 383264 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||| | |||||||||| || ||| ||| |||||||||||| | || | Sbjct 383263 AGCGCGAAGCTACCGTGCACTGGATTATGACTAAACACCTTTAAGTCAGAATCTAGGCTA 383204 Query 121 GAA 123 ||| Sbjct 383203 GAA 383201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819119465472