Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq96 333 3e-86 seq553 95.1 1e-14 >seq96 Length=556063 Score = 333 bits (368), Expect = 3e-86 Identities = 521/739 (71%), Gaps = 10/739 (1%) Strand=Plus/Plus Query 163917 GATCGCTTTGTCTTTGTGGGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTTGCA 163976 || || ||||| ||||| ||||||||||| || |||| ||||| ||| ||| | || Sbjct 6962 GACCGTTTTGTTTTTGTAGGTTGGTCTGGCCTATTTCTCTTTCCTTGTGCCTATTTCGCT 7021 Query 163977 ATTGGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTTGGTACACCCACGGTCTCGCG 164036 | || || ||| || |||||||| ||||| || ||||| ||||| | | || Sbjct 7022 TTAGGGGGTTGGTCCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGAATTAGCA 7081 Query 164037 TCTAGTTACC--TTG--AGGGTGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGA 164092 |||| | ||| ||| || ||| || | || | || || || || || ||| | Sbjct 7082 ---AGTTCCTATTTGGAAGGCTG-TAACTTTTTAACCGTCGCAGTTTCCACTCCGGCTAA 7137 Query 164093 TGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGACTTCATTAG 164152 | | | | || ||| | | |||| ||||||||| | | || || ||||| | | | Sbjct 7138 TAGTTTAGCACACTCTTTATTGTTACTATGGGGTCCTAAAGCACAAGGAGACTTTACTCG 7197 Query 164153 GTGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGAT 164212 ||||| ||| | || || || ||| ||||||| || | || || |||||| || || Sbjct 7198 TTGGTGTCAATTAGGCGGTCTATGGACTTTTGTTGCTCTACATGGCGCTTTCGGACTAAT 7257 Query 164213 CGGTTTCATGCTTCGGCAGTTTGAAATTGCACG-TCTTGTAGGTATCCGTCCGTACAATG 164271 ||||| ||| | || || |||||| |||| || ||| | | | || || || |||| Sbjct 7258 AGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTATTCAAT-TGCGACCTTATAATG 7316 Query 164272 CTATTGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCG 164331 | || || |||||| ||| |||| ||| ||||| || ||||| || || || || | Sbjct 7317 CAATCGCATTCTCTAGTCGAATTGTTGTTTTTGTTTATGTATTCCTAATTTATCCGCTAG 7376 Query 164332 GGCAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCT 164391 | || | | ||||||| ||||| ||| ||||| || || || || || ||||| || Sbjct 7377 GTCAGTTTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTATATTTCGATTCATCC 7436 Query 164392 TGTTCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAG 164451 | || ||||||| || ||||| |||||| | ||||| || ||||||||||| ||||| | Sbjct 7437 TCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTG 7496 Query 164452 GCATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGT 164511 | | | || | |||||| | |||||||||||||||||||| |||| |||||||| | Sbjct 7497 GGGTGTTGGGCGCTGCTCTGTTATGTGCTATTCATGGTGCTACTATAGAAAATACTTTAT 7556 Query 164512 TTGAAGATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGA 164571 ||||||||||||| ||||||| ||| || || | || ||||||| ||||| | Sbjct 7557 TTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAA 7616 Query 164572 CTTACTCGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCA 164631 |||| || |||||||| | || ||||| ||||| || || ||| | ||||||| || Sbjct 7617 CTTATTCAATGGTCACCACTAATCGCTTTTGGTCCCAAATCTTTAGGGTTGCTTTTTCCA 7676 Query 164632 ATAAGCGTTGGTTGCACTT 164650 |||| ||||||| || || Sbjct 7677 ATAAATGTTGGTTACATTT 7695 Score = 141 bits (156), Expect = 1e-28 Identities = 186/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 164646 CACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATC 164705 || ||||||||| | ||||| || || | | | |||| ||| || |||| | || Sbjct 8874 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTGTGGATGAGTGCTCTTGGAGTAGTC 8933 Query 164706 GGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCAGCAGAG 164765 ||||| || || || || ||||| ||||| || || |||||||| || | ||||| || Sbjct 8934 GGTCTGGCGCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 8993 Query 164766 GATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGAAGGACTCCGTGCC 164825 |||| |||||||||||| ||||| || || || || ||| | |||||||| | ||||| Sbjct 8994 GATCTTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCT 9053 Query 164826 TGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGAGGAAGTTCTTCCG 164885 |||||||| | ||| ||||| || ||| || || | || ||||| ||||| || Sbjct 9054 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAATCCCTGAGGAGGTTCTACCC 9113 Query 164886 AGAGGTAACGCACTCTAA 164903 | || ||||| || ||| Sbjct 9114 CGTGGAAACGCTCTTTAA 9131 >seq553 Length=724905 Score = 95.1 bits (104), Expect = 1e-14 Identities = 120/164 (73%), Gaps = 6/164 (4%) Strand=Plus/Minus Query 164433 CATATGATGGGTGTTGCAGGCATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCT 164492 |||||| |||| ||||| || | | || | |||| | | || ||||||||||||||| Sbjct 591237 CATATGGTGGGAGTTGCTGGGGTGTTGGGCGCTGCTTTGTTATGCGCTATTCATGGTGCT 591178 Query 164493 ACCGTAGAGAATACTTTGTTTGAAGATGGTGAACAATCAAATACTTTCAAGGCATTCGAG 164552 ||| || | |||||||| |||||||||||||| ||||||| ||| | || | Sbjct 591177 ACCCTAAAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCTGTGTTTTTAAC 591118 Query 164553 CCTACTCAAG----AG--GAAGAGACTTACTCGATGGTCACTGC 164590 || ||||||| || ||||| ||||| || |||||||| || Sbjct 591117 CCAACTCAAGCTCAAGCTGAAGAAACTTATTCAATGGTCACCGC 591074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559257049243200