Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq387 398 1e-108 seq172 392 5e-107 seq3 365 7e-99 seq7 316 3e-84 seq2 284 2e-74 seq381 271 1e-70 seq5 224 1e-56 >seq387 Length=12500 Score = 398 bits (440), Expect = 1e-108 Identities = 244/256 (95%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| | Sbjct 7298 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGG-TGACTCGCGCTTACTAGGAATT-C 7241 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7240 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 7181 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 7180 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 7121 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 7120 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCG 7061 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 7060 GCCATAGTCCCTCTAA 7045 >seq172 Length=36390 Score = 392 bits (434), Expect = 5e-107 Identities = 243/256 (95%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 9849 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 9906 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 9907 CTCGTTGAAGACCAACAATTGAAATGATCTACCCCCATCACGATGAAATTTCAAAGATTA 9966 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 9967 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 10026 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 10027 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCG 10086 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 10087 GCCATAGTCCCTCTAA 10102 Score = 392 bits (434), Expect = 5e-107 Identities = 243/256 (95%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 25242 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 25299 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 25300 CTCGTTGAAGACCAACAATTGAAATGATCTACCCCCATCACGATGAAATTTCAAAGATTA 25359 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 25360 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 25419 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 25420 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCG 25479 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 25480 GCCATAGTCCCTCTAA 25495 >seq3 Length=24358521 Score = 365 bits (404), Expect = 7e-99 Identities = 237/256 (93%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct 200475 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 200532 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 200533 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 200592 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| | || ||||||||| |||||||||||||||||||||||||| |||| |||||| Sbjct 200593 CCCGGGCATGCCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAACGCGTGTGCGG 200652 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||| |||||||||||||||||||||| | |||||||| |||||||| | Sbjct 200653 CCCAGAACATCTAAAGGCATCACAGACCTGTTATTGCGTTAAACTTCCTTGGCCTAAGCG 200712 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 200713 GCCATAGTCCCTCTAA 200728 Score = 214 bits (236), Expect = 3e-53 Identities = 147/165 (89%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 33 TTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTAT 92 ||||||||||||| ||| |||||| | ||||||||||||||||||||||||||||||||| Sbjct 18938652 TTGATGACTCGCGTTTATTAGGAACT-CCTCGTTGAAGACCAACAATTGCAATGATCTAT 18938710 Query 93 CCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGT 152 ||| | |||||||||||| ||||||||| || | ||| |||||||| || |||||||||| Sbjct 18938711 CCCAAACACGATGAAATTCCAAAGATTATCCTGGCCTATCGGCCAAAGTTATAGACTCGT 18938770 Query 153 TGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGG 197 ||||||||||| |||||||| | |||| || |||||||||||||| Sbjct 18938771 TGAATACATCAATGTAGCGCACATGCGTCCTAGAACATCTAAGGG 18938815 >seq7 Length=17044513 Score = 316 bits (350), Expect = 3e-84 Identities = 226/256 (88%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| || ||||||||||||| |||||| |||||||| ||||||||||||||| | Sbjct 2452608 GTACAAAGGACAAGGACGTAGTCAACACGAGCT-GATGACTCACGCTTACTAGGAATT-C 2452665 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || ||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||| Sbjct 2452666 CTTGTTGAAGACCAACAATTGCAACGATCTATCCCTATCATGATGAAATTTCAAAGATTA 2452725 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | | ||||||||||| |||||||| |||||||||||||||||| ||||||| || Sbjct 2452726 CCCAGGCTTGTCGGCCAAGACTATAGACTCATTGAATACATCAGTGTAGTGCGCGTGTGG 2452785 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 ||||| |||||||||||||||||| ||||||||||| ||||||||||| |||| ||| Sbjct 2452786 CCCAGCACATCTAAGGGCATCACATACCTGTTATTGACTCAAACTTCCTTGGCTTAAGCA 2452845 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 2452846 GCCATAGTCCCTCTAA 2452861 >seq2 Length=42086771 Score = 284 bits (314), Expect = 2e-74 Identities = 219/256 (86%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| | |||| ||||||| || || | ||||||| ||||||||| |||||||| Sbjct 26523146 GTACAAAGGATAAGGACATAGTCAATGCTAG-TAGATGACTTGCGCTTACTGGGAATTTC 26523204 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 26523205 TT-GTTGAAGACCAACAATTGCAATGATCTATTCCCATCACGATGAAATTTCAAAGATTA 26523263 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 | | |||||||||||||| |||||||||||||||||||||||| | | || ||| || Sbjct 26523264 ATCTGGCCTGTCGGCCAAGGCAATAGACTCGTTGAATACATCAGTGCAACACGTGTGTGG 26523323 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 | ||||||||||||||||||||||||||| ||||||||| ||| |||| | ||||| | Sbjct 26523324 CTCAGAACATCTAAGGGCATCACAGACCTATTATTGCCTAAAAATTCCTTAGCCTAGGTG 26523383 Query 241 GCCAT-CTCCCTCGAA 255 |||| |||||| || Sbjct 26523384 ACCATAGTCCCTCTAA 26523399 Score = 248 bits (274), Expect = 1e-63 Identities = 189/221 (86%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||| | Sbjct 34291046 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCACGCTTACTATTAATT-C 34291103 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||| || |||||||| |||| |||||| ||| || ||||||||||||||||| |||||| Sbjct 34291104 CTCATTAAAGACCAATAATTATAATGATTTATTCCTATCACGATGAAATTTCACAGATTA 34291163 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| ||||||| | |||| ||| |||| |||||||||| |||||| ||| ||||| Sbjct 34291164 CCCAAGCCTGTCGACTAAGGCCATAAACTCATTGAATACATTAGTGTACTGCGTGTGCGA 34291223 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221 | || ||||||||||||||||| |||| ||||||||||||| Sbjct 34291224 CTCAAAACATCTAAGGGCATCATAGACTTGTTATTGCCTCA 34291264 Score = 118 bits (130), Expect = 2e-24 Identities = 97/113 (86%), Gaps = 4/113 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||| |||| || |||| ||||||| || || | ||||||| |||||||||||||||||| Sbjct 26521378 GTATAAAGAACAAGGACATAGTCAATGCTAG-TAGATGACTTGCGCTTACTAGGAATTTC 26521436 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCAC-GAT-GAAATTT 111 | ||||||||||||||||||||||||||||| |||||||| || ||||||| Sbjct 26521437 TT-GTTGAAGACCAACAATTGCAATGATCTATTCCCATCACATATAGAAATTT 26521488 >seq381 Length=12965 Score = 271 bits (300), Expect = 1e-70 Identities = 200/229 (87%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||||||| ||| |||||| |||||||||||| ||| | Sbjct 11359 GTACAAAGGGCAGGGACGTAGTCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 11416 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 11417 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 11476 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| |||| |||| |||||||| |||||||| | ||||||||||||||||||| Sbjct 11477 ACCCAAACCTTCCGGCTAAGGTGATGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 11536 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11537 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 11585 >seq5 Length=26133890 Score = 224 bits (248), Expect = 1e-56 Identities = 150/166 (90%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 34 TGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATC 93 |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| |||| Sbjct 9122139 TGATGACTTGCGCTTACTAGGAATT-CCTCGTTGAAGACTAACAATTGCAATGATTTATC 9122081 Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 ||||||||||||||||||||||||||||| || | |||||||||| |||||||| || Sbjct 9122080 CCCATCACGATGAAATTTCAAAGATTACCTGGGTGTCTCGGCCAAGGCTATAGACTCATT 9122021 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCA 199 |||||||| ||||||||||| |||| |||||||| ||||||||||| Sbjct 9122020 GAATACATTAGTGTAGCGCGAGTGCAGCCCAGAATATCTAAGGGCA 9121975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751940525260