Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq381 513 3e-143 seq387 233 4e-59 seq6 230 4e-58 seq7 224 2e-56 seq3 190 4e-46 seq172 188 1e-45 seq2 188 1e-45 seq8 131 3e-28 >seq381 Length=12965 Score = 513 bits (568), Expect = 3e-143 Identities = 302/314 (96%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||||||||||||||||||| ||| ||||||||||||||| || ||||| Sbjct 12318 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAGCCGTATGCCCTTCACTGGGCGTATTGGGGA 12259 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12258 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 12199 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12198 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 12139 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 12138 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 12079 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 12078 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 12019 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 12018 ACGAAAGTTAGGGG 12005 >seq387 Length=12500 Score = 233 bits (258), Expect = 4e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 6406 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 6465 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| |||||| | ||| || |||||||| Sbjct 6466 GGGATAACATCATAGGATTT-CGGTCCTATTCTGTTGGCCTTCGGGATCGGAGTAATGAT 6524 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 6525 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 6584 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 6585 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 6643 Query 311 GTTAGGGG 318 || |||| Sbjct 6644 GTGGGGGG 6651 >seq6 Length=21292200 Score = 230 bits (254), Expect = 4e-58 Identities = 202/248 (81%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| ||| | |||||||||||| Sbjct 5777667 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACACTCTGGATACATTAGCAT 5777726 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | ||| || | |||| ||||| |||| | | ||| | |||||||| Sbjct 5777727 GGGATAACATCATAAGATTT-CGGTCCTATTCTGTTAGCCTTCGGGATCAGAGTAATGAT 5777785 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||||||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 5777786 TAACAGGGATAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 5777845 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 5777846 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 5777904 Query 311 GTTAGGGG 318 |||||||| Sbjct 5777905 GTTAGGGG 5777912 >seq7 Length=17044513 Score = 224 bits (248), Expect = 2e-56 Identities = 198/243 (81%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| ||| | |||||| ||||| Sbjct 2453491 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTTTGGATACATGAGCAT 2453432 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 | |||| | |||||| | |||| ||||| |||||| | ||| || |||||||| Sbjct 2453431 GAGATAACATCATAGGATTT-CGGTCCTATTCTGTTGGCCTTCGGGATCGGAGTAATGAT 2453373 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||||||||| | ||||| || |||||||||||||||||||||| ||| Sbjct 2453372 TAATAGGGATAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATATAT 2453313 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 2453312 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 2453254 Query 311 GTT 313 ||| Sbjct 2453253 GTT 2453251 >seq3 Length=24358521 Score = 190 bits (210), Expect = 4e-46 Identities = 163/199 (82%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 ||||||||||||| |||| | |||||| | |||| ||||| |||||| | ||| | Sbjct 201286 TACATTAGCATGGGATAACATCATAGGATTT-CGGTCCTATTCTGTTGGCCTTCGGGATC 201228 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 | ||||||||||| |||||||||||||| | | ||||| || ||||||| ||||||| Sbjct 201227 GGAGTAATGATTAACAGGGATAGTCGGGGATATTCGTATTTCATAGTCAGAGATGAAATT 201168 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 ||||||||||| ||||| ||| ||||||||||| || |||||||||||||||||||| Sbjct 201167 CTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGGCAAGGATGTTTTCATTAATC 201108 Query 300 AGTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 201107 A-AGAACGAAAGTTAGGGG 201090 >seq172 Length=36390 Score = 188 bits (208), Expect = 1e-45 Identities = 165/203 (81%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 25987 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 25928 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| |||||| | ||| || |||||||| Sbjct 25927 GGGATAACATCATAGGATTT-CGGTCCTATTCTGTTGGCCTTCGGGATCGGAGTAATGAT 25869 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 25868 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 25809 Query 251 TGAAGACTAACTACTGCGAAAGC 273 ||||| ||| ||||||||||| Sbjct 25808 GAAAGACGAACAACTGCGAAAGC 25786 >seq2 Length=42086771 Score = 188 bits (208), Expect = 1e-45 Identities = 193/248 (78%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| |||||||||| |||||||| || | ||||| | |||||||||||| Sbjct 26524038 CTGTTACTTTGAAGAAATTAGAGTTCTCAAAGCAAGCATATGCTCTGGATACATTAGCAT 26523979 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 | |||| | |||| | | ||| ||||| | ||||| | | ||| || |||||||| Sbjct 26523978 GTGATAACATCATAGAATTTT-GGTCCTATTATATTGGTCTTTGGGATCGGAGTAATGAT 26523920 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| | ||| ||| || | | |||||| || || ||||||||||||||||||||||| Sbjct 26523919 TAACAAGGAAAGTAGGAGACATTTGTATTCCATAGTGAGAGGTGAAATTCTTGGATTTAT 26523860 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 |||| ||| ||| | |||| || |||||| |||||||||||||||| |||| ||| Sbjct 26523859 GAAAGATGAACAACTACAGAAGCATTTACCAAGTATGTTTTCATTAATCA-AGAACAAAA 26523801 Query 311 GTTAGGGG 318 |||||||| Sbjct 26523800 GTTAGGGG 26523793 >seq8 Length=17249391 Score = 131 bits (144), Expect = 3e-28 Identities = 135/174 (78%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| |||||||||| |||||| | |||| ||| |||||||||||||||| Sbjct 326873 TTACTTTGAAGGAATTAGAGTGCTCAAAGTAAGCCTACGCTTTGAATACATTAGCATGGG 326814 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||||||||| | | ||| | ||||||||||| Sbjct 326813 ATAACATCATAGGATTT-CGGTCCTATTTTGTTGCCCTTTGGGATTGAAGTAATGATTAA 326755 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 ||| ||||| |||| | | ||| || || |||||||||||||||||||| Sbjct 326754 CAGGAATAGTGAGGGGCATTTGAATTTCATAGTTAGAGGTGAAATTCTTGGATT 326701 Score = 113 bits (124), Expect = 8e-23 Identities = 152/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 ||||||| || |||||| |||| || ||||| || | | | | ||||||||||||| Sbjct 7428566 TTACTTTAAAGAAATTATAGTGCTCTAAGCAAGCATACGTTGTGGATACATTAGCATGAG 7428625 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | || | ||||| |||||| | || || |||| ||||| Sbjct 7428626 ATAACATCATAGGATTT-CGCTCCTATTCTGTTGGCCTTTAAGATTAGATTAATAATTAA 7428684 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| |||| ||||| | | ||| || ||||||||||||||| |||||||| | Sbjct 7428685 CAGGGACAGTCTGGGGTATTCGCATTTCATAAGCAGAGGTGAAATTCTAGGATTTATGAA 7428744 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAA 282 ||| ||| ||| ||||||| || |||| Sbjct 7428745 AGATGAACAACTACGAAAGCATTTGCCAA 7428773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915125283072