Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq8164 336 5e-90 seq323 273 5e-71 seq7 176 1e-41 seq1 100 6e-19 seq2 98.7 2e-18 seq5 75.2 2e-11 >seq8164 Length=157712 Score = 336 bits (372), Expect = 5e-90 Identities = 289/355 (81%), Gaps = 12/355 (3%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 108522 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 108463 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 108462 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 108403 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 108402 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 108343 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 108342 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 108283 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-----TGT 297 || || ||||||||||||||||||||||||| |||||| || ||||| || ||| Sbjct 108282 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 108223 Query 298 CATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 108222 GAGGG---GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 108171 Score = 336 bits (372), Expect = 5e-90 Identities = 289/355 (81%), Gaps = 12/355 (3%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 134989 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 135048 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 135049 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 135108 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 135109 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 135168 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 135169 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 135228 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-----TGT 297 || || ||||||||||||||||||||||||| |||||| || ||||| || ||| Sbjct 135229 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 135288 Query 298 CATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 135289 GAGGG---GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 135340 >seq323 Length=17847 Score = 273 bits (302), Expect = 5e-71 Identities = 286/376 (76%), Gaps = 20/376 (5%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||||||| ||| || ||||||| | | Sbjct 1747 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 1688 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 1687 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 1628 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 | |||| |||||| |||||||||||| ||||||| |||| ||| | |||| Sbjct 1627 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCT--------TATAAC 1576 Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 | || |||| |||||||||||||||||||| ||||| ||||||||||| || | | Sbjct 1575 ACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 1516 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298 ||||||||| ||||||||||| |||||||||||| ||| | | ||| || | | Sbjct 1515 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 1456 Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348 | ||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct 1455 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 1396 Query 349 CTTAACAATAGTTCTC 364 ||| || |||||| Sbjct 1395 CTTCGACATGGTTCTC 1380 >seq7 Length=17044513 Score = 176 bits (194), Expect = 1e-41 Identities = 142/171 (83%), Gaps = 8/171 (5%) Strand=Plus/Plus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| |||||||||||| |||||||||||||| || |||||| ||||| |||||| || | Sbjct 5332067 CCTTGACCTTCCAGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGG 5332126 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-----TGTCATA 301 | ||||||||||||||||||||||||| |||||| || ||||| || ||| | Sbjct 5332127 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGG 5332186 Query 302 GACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 5332187 G---GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 5332234 >seq1 Length=26753024 Score = 100 bits (110), Expect = 6e-19 Identities = 125/169 (74%), Gaps = 8/169 (5%) Strand=Plus/Plus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||| |||| | | ||| ||||||||| |||| | |||| |||||| ||| Sbjct 22740757 CCTTCACCTTCCGGCACTGAGAAGGTGTCAGCTCCCATACGTGATCTTACGACTTTGCAA 22740816 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCATAGA 303 | |||| ||| |||||||||||||||| | || | || || | ||| | || Sbjct 22740817 AGACCTATGTCATTGGTAAACAGTCGCTCGAGCTTGGTCATTGTGAACCCCTTTGTGAG- 22740875 Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||| ||||| |||||| |||| |||||||||||||||||| Sbjct 22740876 GGGGCACC----CTCCCAAAGTTATGGGGCTATTTTGCCGAGTTCCTTA 22740920 Score = 77.0 bits (84), Expect = 7e-12 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 58 CAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 117 ||||||||||||||||| |||| |||| ||||| ||||| ||||||||||||||| Sbjct 16061681 CAAATCGTTACGCCTTTAGTGCAGGTCAAAACTTCGGTGACAAAAAATTTCGCTACCTTA 16061740 Query 118 GGACCGTTATAG 129 | ||| |||||| Sbjct 16061741 GAACCCTTATAG 16061752 >seq2 Length=42086771 Score = 98.7 bits (108), Expect = 2e-18 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 57 CCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 115 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31854387 CCATATCGTTATGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 31854329 >seq5 Length=26133890 Score = 75.2 bits (82), Expect = 2e-11 Identities = 81/107 (76%), Gaps = 8/107 (7%) Strand=Plus/Plus Query 250 CCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-----TGTCATAGAC 304 ||||||||||||||| || ||||| ||||||| || || | || ||| | | Sbjct 5071361 CCTGTGTTTTTGGTATACGGTCGCCTGGGCCTGGTCATTGTGACCCCCTTTGTGAGGG-- 5071418 Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 |||||| |||||||| |||||| ||| ||||||||||||||||| Sbjct 5071419 -GGCACCTCTTCTCCCGAAGTTATAGGGCTATTTTGCCGAGTTCCTT 5071464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062313265664