Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq8164 107 2e-21 seq323 107 2e-21 seq2 75.2 1e-11 >seq8164 Length=157712 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 108551 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 108492 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 108491 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 108433 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 108432 ACAAGGAATTTCGCTACCTTAGGACCGTTA 108403 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 134960 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 135019 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 135020 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 135078 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 135079 ACAAGGAATTTCGCTACCTTAGGACCGTTA 135108 >seq323 Length=17847 Score = 107 bits (118), Expect = 2e-21 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | ||||||||| | Sbjct 1772 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 1713 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| |||||||||||||||||||| ||||| | Sbjct 1712 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 1653 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||| |||| Sbjct 1652 GACAAGGAATTTCGCTACCTTAGGACAGTTA 1622 >seq2 Length=42086771 Score = 75.2 bits (82), Expect = 1e-11 Identities = 44/46 (96%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 162 || ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 31854374 CCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 31854329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547156722636