Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq381 185 1e-44 seq387 80.6 3e-13 seq172 80.6 3e-13 seq8 73.4 5e-11 >seq381 Length=12965 Score = 185 bits (204), Expect = 1e-44 Identities = 160/193 (83%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 12148 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 12207 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| |||| ||||||||||||||||| | | Sbjct 12208 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCAATA 12267 Query 126 C-ACCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182 | ||| |||| ||||||| ||||| ||| ||| ||| | || |||||| ||| Sbjct 12268 CGCCCAGTGAAGGGCATAC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACCAGTACACGC 12326 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 12327 GGTGAGGCGGACC 12339 >seq387 Length=12500 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 6502 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 6444 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 6443 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 6406 >seq172 Length=36390 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 25891 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 25949 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 25950 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 25987 >seq8 Length=17249391 Score = 73.4 bits (80), Expect = 5e-11 Identities = 74/94 (79%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 14 CAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGCGTAA 72 |||||||||||| || | |||||| | |||| |||||||||||||||| ||||| Sbjct 326781 CAACAAAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATTCAAAGCGTAG 326839 Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 || | |||||| |||||||||| |||| |||| Sbjct 326840 GCTTACTTTGAGCACTCTAATTCCTTCAAAGTAA 326873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595152926376