Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq381 527 1e-147 seq387 304 2e-80 seq172 300 3e-79 seq3 291 2e-76 seq7 241 2e-61 seq2 194 3e-47 seq5 138 2e-30 >seq381 Length=12965 Score = 527 bits (584), Expect = 1e-147 Identities = 304/312 (97%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 17 AGGGAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCT 76 || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11671 AGCGAACGAGACTTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCT 11612 Query 77 TAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11611 TAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 11552 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 11551 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTAG 11492 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11491 CCGGAAGGTTTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 11432 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 |||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| Sbjct 11431 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCATGTCATCAGCATGCGTTGACTACGTCC 11372 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 11371 CTGCCCTTTGTA 11360 >seq387 Length=12500 Score = 304 bits (336), Expect = 2e-80 Identities = 228/264 (86%), Gaps = 4/264 (2%) Strand=Plus/Plus Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | ||| | ||| | |||||||||||||||||||||| Sbjct 7036 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAA-GGAAGTTTGAGGCAATAACAGG 7094 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 7095 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGT 7154 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| Sbjct 7155 CTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGA 7213 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||| ||| ||||||||||||||| ||||||||||||| |||| |||| |||| Sbjct 7214 TCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCACCAGCTCGCG 7273 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||| Sbjct 7274 TTGACTACGTCCCTGCCCTTTGTA 7297 >seq172 Length=36390 Score = 300 bits (332), Expect = 3e-79 Identities = 227/264 (86%), Gaps = 4/264 (2%) Strand=Plus/Minus Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | ||| | ||| | |||||||||||||||||||||| Sbjct 10111 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAA-GGAAGTTTGAGGCAATAACAGG 10053 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 10052 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGT 9993 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || ||||||||| ||| | |||||||||| | ||| | ||||| ||||| |||| Sbjct 9992 CTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGGTAGA 9934 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||| ||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||| Sbjct 9933 TCATTTCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCG 9874 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||| Sbjct 9873 TTGACTACGTCCCTGCCCTTTGTA 9850 Score = 300 bits (332), Expect = 3e-79 Identities = 227/264 (86%), Gaps = 4/264 (2%) Strand=Plus/Minus Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | ||| | ||| | |||||||||||||||||||||| Sbjct 25504 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAA-GGAAGTTTGAGGCAATAACAGG 25446 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 25445 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGT 25386 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || ||||||||| ||| | |||||||||| | ||| | ||||| ||||| |||| Sbjct 25385 CTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGGTAGA 25327 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||| ||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||| Sbjct 25326 TCATTTCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCG 25267 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||| Sbjct 25266 TTGACTACGTCCCTGCCCTTTGTA 25243 >seq3 Length=24358521 Score = 291 bits (322), Expect = 2e-76 Identities = 225/264 (85%), Gaps = 4/264 (2%) Strand=Plus/Minus Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | ||| | ||| | |||||||| | ||||||||||| Sbjct 200737 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAA-GGAAGTTTAACGCAATAACAGG 200679 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 ||||||||||| |||||||||||||||||||| |||| |||||||| | |||||||| Sbjct 200678 TCTGTGATGCCTTTAGATGTTCTGGGCCGCACACGCGTTACACTGATGTATTCAACGAGT 200619 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||||||||| | | | |||||||||| | ||| | ||||| |||||||||| Sbjct 200618 CTATAGCCTTGGCCGGCATGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGA 200560 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 200559 TCATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCG 200500 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||| Sbjct 200499 TTGACTACGTCCCTGCCCTTTGTA 200476 Score = 131 bits (144), Expect = 3e-28 Identities = 128/164 (78%), Gaps = 1/164 (1%) Strand=Plus/Minus Query 134 CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCT 193 |||||||||||||| || |||| | |||||||| ||| | |||||||| || || | Sbjct 18938815 CCCTTAGATGTTCTAGGACGCATGTGCGCTACATTGATGTATTCAACGAGTCTATAACTT 18938756 Query 194 TGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAA 253 |||||| ||| | || ||||||| || || ||||| | |||||||| |||||||| Sbjct 18938755 TGGCCGATAGGCCAGGATAATCTTTGGAATTTCA-TCGTGTTTGGGATAGATCATTGCAA 18938697 Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCA 297 || ||| ||||||||||||| | |||| ||| |||| ||||||| Sbjct 18938696 TTGTTGGTCTTCAACGAGGAGTTCCTAATAAACGCGAGTCATCA 18938653 >seq7 Length=17044513 Score = 241 bits (266), Expect = 2e-61 Identities = 211/259 (81%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||||||| | ||| ||||| | ||||||||||| ||||||||||| ||| Sbjct 2452865 CTTCTTAGAGGGACTATGGCTGCTTAAGCCAA-GGAAGTTTGAGTCAATAACAGGTATGT 2452807 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 ||||||||||||||| ||||||| ||||||| ||||||||| | ||| |||| || Sbjct 2452806 GATGCCCTTAGATGTGCTGGGCCACACGCGCACTACACTGATGTATTCAATGAGTCTATA 2452747 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 |||||||| | | |||||||||||| | ||| | || || | |||||||| | || Sbjct 2452746 GTCTTGGCCGACAAGCCTGGGTAATCTT-TGAAATTTCATCATGATAGGGATAGATCGTT 2452688 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||| ||| |||||||| |||||| ||||||||||| | ||||||||| || ||||| Sbjct 2452687 GCAATTGTTGGTCTTCAACAAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGTGTTGAC 2452628 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||| || |||||||| Sbjct 2452627 TACGTCCTTGTCCTTTGTA 2452609 >seq2 Length=42086771 Score = 194 bits (214), Expect = 3e-47 Identities = 200/259 (77%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||||||||| | | | || | | |||| ||| ||||||||| |||||||| Sbjct 26523404 GCTTCTTAGAGGGACTATGGTCACCTAGGCTAAGGAATTTTTAGGCAATAATAGGTCTGT 26523345 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 ||||||||||||||||||| ||| ||| || | | |||||| | |||||||| || Sbjct 26523344 GATGCCCTTAGATGTTCTGAGCCACACACGTGTTGCACTGATGTATTCAACGAGTCTATT 26523285 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||||||||| ||| | | ||||||| | ||| | ||||| |||| ||||| |||| Sbjct 26523284 GCCTTGGCCGACAGGCCAGATTAATCTT-TGAAATTTCATCGTGATGGGAATAGATCATT 26523226 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||| ||| |||||||| || ||| || ||||||||| |||||| | || |||| Sbjct 26523225 GCAATTGTTGGTCTTCAACAAGAAATTCCCAGTAAGCGCAAGTCATCTACTAGCATTGAC 26523166 Query 310 TACGTCCCTGCCCTTTGTA 328 || |||| | |||||||| Sbjct 26523165 TATGTCCTTATCCTTTGTA 26523147 Score = 179 bits (198), Expect = 7e-43 Identities = 172/219 (79%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 110 TGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 ||||||||||||| |||| ||||||||||||||||| || | ||||| ||| |||||| Sbjct 34291264 TGAGGCAATAACAAGTCTATGATGCCCTTAGATGTTTTGAGTCGCACACGCAGTACACTA 34291205 Query 170 ACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGT 229 | | ||| ||||| || |||| | || ||| |||||||||| || ||| | | Sbjct 34291204 ATGTATTCAATGAGTTTATGGCCTTAGTCGACAGGCTTGGGTAATCT-GTGAAATTTCAT 34291146 Query 230 CGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCG 289 |||| | || ||| | |||| |||||||| |||| || ||||||| ||||||||| | Sbjct 34291145 CGTGATAGGAATAAATCATTATAATTATTGGTCTTTAATGAGGAATTAATAGTAAGCGTG 34291086 Query 290 TGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||| |||||||| ||||||||||||||||||| Sbjct 34291085 AGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTA 34291047 Score = 82.4 bits (90), Expect = 1e-13 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 231 GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGT 290 ||| |||| ||||| |||||||||| ||| |||||||| || ||| |||||||||||| Sbjct 26521476 GTGATGGGAATAGATCATTGCAATTGTTGGTCTTCAACAAGAAATTCCTAGTAAGCGCAA 26521417 Query 291 GTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||| | || |||| || |||| || |||| || Sbjct 26521416 GTCATCTACTAGCATTGACTATGTCCTTGTTCTTTATA 26521379 >seq5 Length=26133890 Score = 138 bits (152), Expect = 2e-30 Identities = 132/168 (79%), Gaps = 1/168 (1%) Strand=Plus/Plus Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||| |||||||| |||| ||||||||||| | | ||| |||| || | Sbjct 9121975 TGCCCTTAGATATTCTGGGCTGCACTCGCGCTACACTAATGTATTCAATGAGTCTATAGC 9122034 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||||||| | | ||||||||| | ||| | ||||| |||||||| | |||||| Sbjct 9122035 CTTGGCCGAGACACCCAGGTAATCTT-TGAAATTTCATCGTGATGGGGATAAATCATTGC 9122093 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 |||| || ||||||||||||||| |||||||||||| ||||||||| Sbjct 9122094 AATTGTTAGTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGC 9122141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947122670592