Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq8164 188 2e-45 seq323 183 1e-43 >seq8164 Length=157712 Score = 188 bits (208), Expect = 2e-45 Identities = 397/583 (68%), Gaps = 38/583 (7%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 107119 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 107178 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 107179 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 107238 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 107239 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 107298 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 107299 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 107353 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 107354 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 107411 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | ||| | || | || |||||| ||||| | |||| | | | | Sbjct 107412 CCTCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 107471 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 107472 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 107529 Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456 || || | ||| ||||||| |||| ||| || | |||||||||| | || ||||| Sbjct 107530 GGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 107588 Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516 |||||||| |||||||| ||||| || ||| || || | |||| |||| | Sbjct 107589 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 107647 Query 517 CTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 || ||||||| ||||||| | | ||| |||||||||||||| Sbjct 107648 CTGCCGAAGCTGTGGGAT-GTAAAAATGCATCGGTAGGGGAGC 107689 Score = 188 bits (208), Expect = 2e-45 Identities = 397/583 (68%), Gaps = 38/583 (7%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 136392 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 136333 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 136332 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 136273 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 136272 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 136213 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 136212 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 136158 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 136157 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 136100 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | ||| | || | || |||||| ||||| | |||| | | | | Sbjct 136099 CCTCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 136040 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 136039 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 135982 Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456 || || | ||| ||||||| |||| ||| || | |||||||||| | || ||||| Sbjct 135981 GGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 135923 Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516 |||||||| |||||||| ||||| || ||| || || | |||| |||| | Sbjct 135922 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 135864 Query 517 CTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 || ||||||| ||||||| | | ||| |||||||||||||| Sbjct 135863 CTGCCGAAGCTGTGGGAT-GTAAAAATGCATCGGTAGGGGAGC 135822 >seq323 Length=17847 Score = 183 bits (202), Expect = 1e-43 Identities = 323/461 (70%), Gaps = 26/461 (6%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| |||| Sbjct 214 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 273 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 274 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 333 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 334 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 391 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG---TCATTGCGACTTACCAAAC 267 | || | | ||||||||||| |||||||| | |||| || |||||||| | Sbjct 392 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACC 451 Query 268 CATTGCAAACTCCGAATGC--GC----ATCAGTTTTACCGCGGGAGTGAGGGCATGGGTG 321 | | ||||||||||| | || ||| || ||| | || | | ||||| Sbjct 452 CCAGGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAGACAGACTTTTG----GGGTG 507 Query 322 CTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACA 381 ||||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 508 CTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATC 567 Query 382 GCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAGC 439 || ||| || || |||| |||| || | |||| | |||| || ||||||||||| Sbjct 568 ACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGC 623 Query 440 AGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||| || ||| |||| |||||| |||||||| ||| || Sbjct 624 AGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689462061056