Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq387 684 0.0 seq381 679 0.0 seq3 533 5e-149 seq2 513 4e-143 seq8 423 6e-116 seq172 291 3e-76 seq4 122 3e-25 seq323 78.8 3e-12 >seq387 Length=12500 Score = 684 bits (758), Expect = 0.0 Identities = 475/534 (89%), Gaps = 10/534 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 1032 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 973 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 972 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 913 Query 127 GGCC--CGCGAAG--GACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTC 181 |||| ||||| | | |||| ||| ||| || || || | || | |||| ||| Sbjct 912 GGCCGACGCGAGGCCGGCCTTGGGTCCAAAAAGAGG--GGCGATGCCCCGCCTCCGTTTC 855 Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCC 241 | || ||||||||| |||| ||| |||||||||||||| || ||||||| |||||| Sbjct 854 ACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCAATTTCGCCGAA---GCTCCC 798 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 797 CCTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 738 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 737 TCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGG 678 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 ||| |||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 677 AGACAGGGACCGGGGGGATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 618 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 617 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 558 Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 557 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 504 >seq381 Length=12965 Score = 679 bits (752), Expect = 0.0 Identities = 412/435 (95%), Gaps = 3/435 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7948 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 8007 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8008 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 8067 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| || ||||| ||| |||| ||| |||||||||||| ||||| Sbjct 8068 GGCCCGCGAAGGACCTTAATGCTAGAAATTGGGCGGTAAAGCCCAGTTCCGCTTAATTGA 8127 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct 8128 TTAAGTAAAAAAACGATAAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 8184 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 8185 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 8244 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 8245 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 8304 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8305 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 8364 Query 427 TGGCTACCTTAAGAG 441 ||||||||||||||| Sbjct 8365 TGGCTACCTTAAGAG 8379 >seq3 Length=24358521 Score = 533 bits (590), Expect = 5e-149 Identities = 335/361 (93%), Gaps = 3/361 (1%) Strand=Plus/Minus Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC 234 ||| |||| || ||||||||| || | ||| ||||||||||||| || || |||| Sbjct 18255682 CCGTTTCACGGAATAAGTAAAATAATGTTAAAAATAGTGGTATTTCAATTTCGTCGAA-- 18255625 Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18255624 -GCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 18255566 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 |||| ||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| Sbjct 18255565 AACAAGGTCTTCTTTCCCCGCTAATTCTGCCAAGCCCGTTCCCTTAGCTGTGGTTTCGCT 18255506 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18255505 GGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 18255446 Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 18255445 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGTTT 18255386 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 18255385 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCAT 18255326 Query 535 C 535 | Sbjct 18255325 C 18255325 >seq2 Length=42086771 Score = 513 bits (568), Expect = 4e-143 Identities = 312/330 (95%), Gaps = 3/330 (1%) Strand=Plus/Plus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233 |||| |||| || ||||||||| |||| ||| |||||||||||||| || ||||||| Sbjct 30610865 TCCGTTTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCAATTTCGCCGAA- 30610923 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 30610924 --GCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 30610981 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 30610982 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 30611041 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 30611042 TGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 30611101 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 30611102 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCACCGTTTACCCGCGCT 30611161 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGA 503 |||||||||||||||||||||||||||||| Sbjct 30611162 TGGTTGAATTTCTTCACTTTGACATTCAGA 30611191 Score = 255 bits (282), Expect = 2e-65 Identities = 161/174 (93%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411 ||| ||||||||| ||||||||| |||||||||||||||||||||| | |||||||||| Sbjct 31407327 GCTGGATAGTAGACAGGGACAGTAGGAATCTCGTTAATCCATTCATAAGTGTCACTAATT 31407268 Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 471 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 31407267 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCATGTCGTTTACCCGCG 31407208 Query 472 CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| Sbjct 31407207 CTTGGTTGAGTTTCTTCACTTTGACATTCAGAGTGCTGGGCTGAAATCACATTG 31407154 >seq8 Length=17249391 Score = 423 bits (468), Expect = 6e-116 Identities = 264/283 (93%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233 |||| |||| || ||||||||| |||| ||| |||||||||||||| || ||||||| Sbjct 2229602 TCCGTTTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCAATTTCGCCGAA- 2229660 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 |||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2229661 --GCTCCCCCTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGGGTCAAGCT 2229718 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2229719 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 2229778 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2229779 TGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 2229838 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2229839 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 2229881 >seq172 Length=36390 Score = 291 bits (322), Expect = 3e-76 Identities = 245/296 (83%), Gaps = 10/296 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 22034 CTTTTGTTCTACACGAGATTTCTGTTCTCATTGAGCTCATCTTAGGACACCTGCGTTATC 22093 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||| ||||||||||||||| ||||||||||||| || || ||||| Sbjct 22094 TTTTAACAGATGTGCCGTCCCAGCCAAACTCCCTACCTGACAATGTCTTCCGCCTGGATC 22153 Query 127 GGCC--CGCGAAG--GACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTC 181 |||| ||||| | |||||| ||| ||| || || || | || | |||| ||| Sbjct 22154 GGCCGACGCGAGGCCGACCTTGGGTCCAAAAAGAGG--GGCGATGCCCCGCCTCCGTTTC 22211 Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCC 241 | || ||||||||| |||| ||| |||||||||||||| || ||||||| |||||| Sbjct 22212 ACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCAATTTCGCCGAA---GCTCCC 22268 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 22269 ACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGACAAGCTCAAC 22324 >seq4 Length=23934096 Score = 122 bits (134), Expect = 3e-25 Identities = 84/95 (88%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||| |||||| ||||| |||| ||||||||||| |||| ||||||||||| |||||||| Sbjct 6086981 TCCTACTTATACTACATCTCTTAAGTCATTTCATAAAGCTGGACTAGAGTCGAGCTCAAC 6087040 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCG 332 |||||||||||||||| ||||||| | |||||||| Sbjct 6087041 AGGGTCTTCTTTCCCCACTGATTCTGTCAAGCCCG 6087075 >seq323 Length=17847 Score = 78.8 bits (86), Expect = 3e-12 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 1699 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 1640 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||| || ||| | ||||||| |||||||||||| | |||| Sbjct 1639 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 1594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635066502272