Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 150 1e-31 >seq4 Length=23934096 Score = 150 bits (166), Expect = 1e-31 Identities = 386/579 (67%), Gaps = 13/579 (2%) Strand=Plus/Minus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| | || ||| || ||| |||||||| ||||| || |||||||||| Sbjct 23381244 TGTTCCCGATCCAATACCCGGAAATCTGGGAGATGTACAAGAAGGCCGAGGCTTCCTTCT 23381185 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCG 61183 |||| | |||||||| ||| | | | | ||| | | ||||| | || | | Sbjct 23381184 GGACCGCCGAGGAGGTTGATCTCTGCCAGGACCTACGCCATTGGGAAACTCTAACCCCTG 23381125 Query 61184 GTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCA 61243 | || | || ||||| | || ||| | || ||||| || || || ||||| ||||| Sbjct 23381124 GCGAGAAGCACTTCATCACCCACGTGCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTTT 23381065 Query 61244 ATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCT 61303 |||||| | | | | ||| | |||| || || || || ||||| || |||| Sbjct 23381064 TGGAGAATCTCGCCGGAAGGTTCATGAAGGAAGTCCAGGTCTCCGAGGCTCGCGCCTTCT 23381005 Query 61304 ACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATA 61363 ||||||||||||| ||||| ||||| ||||||| ||||||||||| | || | || | Sbjct 23381004 ACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTGGAGA 23380945 Query 61364 CGTACATCAGGGA-GCGGGCG-GAACGTGAAC--GATTGTTCAATGCCATCGAGACGATA 61419 | ||||||| ||| ||| || ||| |||| | || ||| | || ||||| || || Sbjct 23380944 CCTACATCAAGGACTCGGACGAGAA---GAACAGGCTTTTTC-ACGCGATCGATACCATT 23380889 Query 61420 CCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA 61479 || || | ||| || | |||||| | |||||| | | || | | Sbjct 23380888 CCCTGCGTCACCAAGAAGGCCCAGTGGGCCCTACGCTGGATCGACGGCTCA---GAATCG 23380832 Query 61480 TTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTC-AGTGGATCGTT 61538 |||| || || | |||| ||||| || || || |||| ||| | ||| || Sbjct 23380831 TTTGCGGAGCGGATCGTGGCCTTTGCTTGCGTGGAAGGGATATTCTTCTCGGGGAGTTTT 23380772 Query 61539 TGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGA 61598 || ||| || |||||| | ||||| || || | ||||| || ||||| ||| || || Sbjct 23380771 TG-CGCGATATTTTGGCTAAAGAAGCGCGGGTTAATGCCGGGACTGACGTTCTCAAACGA 23380713 Query 61599 GTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 |||||| || | || ||||| |||| || || || || Sbjct 23380712 GTTGATCTCGAGAGATGAGGGTTTGCACTGCGACTTCGC 23380674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397528442480960