Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq192 235 1e-59 seq2 224 3e-56 seq3 181 3e-43 >seq192 Length=157790 Score = 235 bits (260), Expect = 1e-59 Identities = 298/409 (73%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 103030 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 103089 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 103090 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 103149 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 103150 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 103209 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 103210 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 103269 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 103270 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 103329 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 103330 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 103389 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 103390 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 103438 Score = 235 bits (260), Expect = 1e-59 Identities = 298/409 (73%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 140557 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 140498 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 140497 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 140438 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 140437 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 140378 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 140377 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 140318 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 140317 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 140258 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 140257 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 140198 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 140197 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 140149 >seq2 Length=30405870 Score = 224 bits (248), Expect = 3e-56 Identities = 298/411 (73%), Gaps = 6/411 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 1937737 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 1937796 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||| ||| || ||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 1937797 AAGCTTTATCCGAAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 1937856 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 1937857 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 1937916 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 1937917 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 1937976 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| || | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 1937977 CGAAAGCGCTCTGCTGGGCCTACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 1938036 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTA--GTTGTTGGGGATTTA 360 |||||||||||| ||||||| ||| |||||||| |||| | ||| | || | Sbjct 1938037 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGCGCTGTGCGTTATCGA 1938096 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || ||||||||||||| ||||| ||||||||||| ||| Sbjct 1938097 C--CCGTGCAGTGCTGTAGCTAACGCGTTAAGTTTCCCGCCTGGGGAGTAC 1938145 >seq3 Length=27368013 Score = 181 bits (200), Expect = 3e-43 Identities = 286/409 (70%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| | ||||||| ||| |||||||||||||||| ||| ||| Sbjct 15800348 TATCTGGGGAATAAGCATCTGCTAACTTTATGCTAGCAGCCGCGGTAATATAGAGGATGC 15800407 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| | |||| | |||||||||||| | | ||| || | | |||| | | || Sbjct 15800408 AAGCGTTATCCAGAATGATTGGGCGTAAAGCATCTGTAGGTGGCTTTTTAAGTCCGCCGT 15800467 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| | | | ||| | || |||| || || Sbjct 15800468 CAAATCCCAGGGCTCAACCCTGGACAGGTGGTGGAAACTACCAAGCTGGAGTATGGTAGG 15800527 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| || |||||||||||||| || | ||||||||| || Sbjct 15800528 GGCAGAGGGAATTTCTGGTGGAGTGGTGAAATGCGTAGAGATCGAAAAGAACACCAACGG 15800587 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||| ||| | |||| |||||||| || | |||||||| |||||||||| | Sbjct 15800588 TGAAAGCACTCTGTTGGGCCGACACTGACACTAAGAGACGAAAGCTAGGGGAGCAAATGG 15800647 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | || | Sbjct 15800648 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGAGCTGTGCATATCGA 15800707 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || | ||||||||| ||| |||| |||||||||| ||| Sbjct 15800708 CCCGTGCAATGCTGTAGCTAACACGTTAAGTATCTCGCCTGGGGAGTAC 15800756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289597523968