Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq192 264 3e-68 seq7 190 5e-46 seq5 163 7e-38 seq1 73.4 1e-10 >seq192 Length=157790 Score = 264 bits (292), Expect = 3e-68 Identities = 307/418 (73%), Gaps = 27/418 (6%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 108560 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 108501 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 108500 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 108441 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | ||||||||||||||| |||||||||||| || ||| | | | || | ||| Sbjct 108440 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 108381 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 108380 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 108321 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 108320 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 108267 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| ||| | ||||||||||||||||||| || || Sbjct 108266 CTTTGTGAG-----------------GGGGCACCCCTTCTCCCGAAGTTACGGGGCTATT 108224 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||| |||||||| ||||| |||| || ||| ||||||||||||| | |||| Sbjct 108223 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 108166 Score = 264 bits (292), Expect = 3e-68 Identities = 307/418 (73%), Gaps = 27/418 (6%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 135027 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 135086 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 135087 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 135146 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | ||||||||||||||| |||||||||||| || ||| | | | || | ||| Sbjct 135147 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 135206 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 135207 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 135266 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 135267 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 135320 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| ||| | ||||||||||||||||||| || || Sbjct 135321 CTTTGTGAG-----------------GGGGCACCCCTTCTCCCGAAGTTACGGGGCTATT 135363 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||| |||||||| ||||| |||| || ||| ||||||||||||| | |||| Sbjct 135364 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 135421 >seq7 Length=22388614 Score = 190 bits (210), Expect = 5e-46 Identities = 265/371 (71%), Gaps = 29/371 (8%) Strand=Plus/Plus Query 53 GAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 112 ||||||||||| ||||||||||| ||| ||| ||||||| |||||||||||||||||| Sbjct 5473546 GAGACAGCGCCCAGATCGTTACGCCTTTCATGCGGGTCGGA-CTTACCCGACAAGGAATT 5473604 Query 113 TCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT 172 | ||||||||| ||| ||||| |||||| |||||||| |||||||||||| || || Sbjct 5473605 TTGCTACCTTA-GACTGTTATAGTTACGACCGCCGTTCACCGGGGCTTCGGTCGCCGTCT 5473663 Query 173 ----TCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCT 228 | | | || | ||| | || ||||| |||||| |||||||||||| ||| Sbjct 5473664 CCCCTGTCATCAGGTGACCAACTTCCTTGACCTTTCGGCACTGGGCAGGCGTCAGCCCCC 5473723 Query 229 ATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTG 288 |||| | ||| || ||||||||| |||||||||| ||||||||||| ||||| Sbjct 5473724 ATACATGGTCTTACGACTTTGCAGAGACCTGTGTTTTTGGTAAACAGTCGCCCGAGCCTG 5473783 Query 289 GTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCT 348 || || ||||| | | | | || ||| ||| ||||| Sbjct 5473784 GTCACTGCGACCCCCTT--TGTGAGGGGGCA---CCT------------------CTTCT 5473820 Query 349 CCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGG 408 ||||||||| || || ||||||| |||||||| ||||| |||| || ||| || Sbjct 5473821 CCCGAAGTTTTGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGG 5473880 Query 409 TATTCTCTACC 419 ||||||||||| Sbjct 5473881 TATTCTCTACC 5473891 Score = 77.0 bits (84), Expect = 8e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||||||| |||||| |||| ||||| | ||||||| | ||||||| |||||||| Sbjct 6756903 ATCGTTACGCCTTTCGTGTGGGTCAAAACTTTCACGACAAGAATTTTCGCTGCCTTAGGA 6756844 Query 127 CCGTTATTGTTACGGCCGCCGTTTA 151 || |||| |||| | ||| |||| Sbjct 6756843 CCCTTATAGTTATAGGAGCCATTTA 6756819 >seq5 Length=18496696 Score = 163 bits (180), Expect = 7e-38 Identities = 288/418 (69%), Gaps = 34/418 (8%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || || |||| || | ||| ||| |||||| || Sbjct 10567323 TACTCCGCATCTTCACGGAGAAATCTATTTTACCGGGTCCTTTTCGGAAACAGCGGGGCA 10567382 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC------GACAAGGAATTTCGCTACC 120 || |||| |||||||||| | ||||| | |||||||||||||||| || Sbjct 10567383 GTCTTTAC-----TCGTGCAGGTTGCTACTTATGCTTATGCGACAAGGAATTTCGCTTCC 10567437 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||| || | ||||| || |||||||||||||||||| || | ||||| || Sbjct 10567438 TTAGGACAGT-AGAGTTACTGC-GCCGTTTACCGGGGCTTCCATTCAAAGCTTA----TA 10567491 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 | || | | ||||||| |||||||||||| |||| || |||||| || || Sbjct 10567492 AC--ACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTT 10567549 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 | || ||||||| ||||||||||||||||||||||| | |||||||| | | | Sbjct 10567550 ACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCT 10567609 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 360 | | | | | || || |||| |||||||||||||||||| Sbjct 10567610 TTCCTAATCAAA---AGATAGGAGAGCACC------------CCTTCTCCCGAAGTTACG 10567654 Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 | | | ||||||| ||||||||| | ||||||||||||||| | |||| |||||| Sbjct 10567655 GGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTAC 10567712 >seq1 Length=47851208 Score = 73.4 bits (80), Expect = 1e-10 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 121 |||||||| || |||||| ||||| |||||||||||||||||||||||||| || Sbjct 10423578 ATCGTTACACCTTTCGTGTGGGTCGAAACTTACCCGACAAGGAATTTCGCTATCT 10423632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260797579264