Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq192 336 5e-90 seq7 262 8e-68 seq5 197 3e-48 seq6 87.8 4e-15 seq1 84.2 5e-14 >seq192 Length=157790 Score = 336 bits (372), Expect = 5e-90 Identities = 289/355 (81%), Gaps = 12/355 (3%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 108560 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 108501 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 108500 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 108441 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 108440 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 108381 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 108380 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 108321 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-----TGT 297 || || ||||||||||||||||||||||||| |||||| || ||||| || ||| Sbjct 108320 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 108261 Query 298 CATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 108260 GAGGG---GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 108209 Score = 336 bits (372), Expect = 5e-90 Identities = 289/355 (81%), Gaps = 12/355 (3%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 135027 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 135086 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 135087 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 135146 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 135147 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 135206 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 135207 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 135266 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-----TGT 297 || || ||||||||||||||||||||||||| |||||| || ||||| || ||| Sbjct 135267 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 135326 Query 298 CATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 135327 GAGGG---GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 135378 >seq7 Length=22388614 Score = 262 bits (290), Expect = 8e-68 Identities = 266/338 (79%), Gaps = 20/338 (6%) Strand=Plus/Plus Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86 |||||||| || || | ||||||| ||||| ||||||||||||||| |||||||||| Sbjct 5473526 ATTTCACCAAGCCTCTCTCCGAGACAGCGCCCAGATCGTTACGCCTTTCATGCGGGTCGG 5473585 Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146 | ||||||||||||||||||| |||||||||| || |||||||||||| |||||||| || Sbjct 5473586 A-CTTACCCGACAAGGAATTTTGCTACCTTAG-ACTGTTATAGTTACGACCGCCGTTCAC 5473643 Query 147 TGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT--CC-----CCTTAACCTTCCA 199 ||||||| || | | | || || || | ||| | || |||| ||||| | Sbjct 5473644 CGGGGCTTCGGT-CGCCGTCTCCCCTG-TC-ATCAGGTGACCAACTTCCTTGACCTTTCG 5473700 Query 200 GCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTT 259 |||| |||||||||||||| || |||||| ||||| |||||| ||||| ||||||||||| Sbjct 5473701 GCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCAGAGACCTGTGTTTT 5473760 Query 260 TGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-----TGTCATAGACAGGCACCCCT 314 |||||||||||||| | |||| || ||||| || ||| | | |||||| || Sbjct 5473761 TGGTAAACAGTCGCCCGAGCCTGGTCACTGCGACCCCCTTTGTGAGGG---GGCACCTCT 5473817 Query 315 TCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||| ||||| |||| |||||||||||||||||| Sbjct 5473818 TCTCCCGAAGTTTTGGGGCTATTTTGCCGAGTTCCTTA 5473855 Score = 91.5 bits (100), Expect = 3e-16 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 58 CAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 117 || |||||||||||||||||| ||||| ||||| | ||||||| | ||||||| ||||| Sbjct 6756906 CAGATCGTTACGCCTTTCGTGTGGGTCAAAACTTTCACGACAAGAATTTTCGCTGCCTTA 6756847 Query 118 GGACCGTTATAGTTACGGCCGCCGTTTA 145 ||||| ||||||||| | ||| |||| Sbjct 6756846 GGACCCTTATAGTTATAGGAGCCATTTA 6756819 >seq5 Length=18496696 Score = 197 bits (218), Expect = 3e-48 Identities = 218/288 (76%), Gaps = 22/288 (8%) Strand=Plus/Plus Query 89 CTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTG 148 |||| ||||||||||||||||| ||||||||| || | |||||| || ||||||||| | Sbjct 10567412 CTTATGCGACAAGGAATTTCGCTTCCTTAGGACAGT-AGAGTTACTGC-GCCGTTTACCG 10567469 Query 149 GGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCCTTA--ACCTTCCAGCACCGG 206 |||||| |||| |||| ||||| || |||| ||||||||||||||| Sbjct 10567470 GGGCTTCCATTCAAAGCTTA--------TAACACTTCTCCTTCCGACCTTCCAGCACCGG 10567521 Query 207 GCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAA 266 ||||| ||||| ||||||||||| || | |||||||||| ||||||||||| |||| Sbjct 10567522 GCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAA 10567581 Query 267 CAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC------ATAGACAG----GCACCCCTTC 316 |||||||| ||| | | ||| || | | | ||| || |||||||||| Sbjct 10567582 CAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGATAGGAGAGCACCCCTTC 10567641 Query 317 TCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 |||| |||||||||||||||||||||||||||||| || |||||| Sbjct 10567642 TCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTC 10567689 >seq6 Length=30767194 Score = 87.8 bits (96), Expect = 4e-15 Identities = 126/178 (71%), Gaps = 20/178 (11%) Strand=Plus/Minus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| |||||| |||| | | ||| |||||| || |||||| |||| |||||| ||| Sbjct 27006284 CCTTCACCTTCTGGCACTGAGAAGGTGTCAGCCCC-ATACATGATCTTACGACTTCGCAA 27006226 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACAG 306 | |||| ||||||||||||| |||||| | || | || |||| || Sbjct 27006225 AGACCTATGTTTTTGGTAAATAGTCGCCCGAGCTTGGTCACTGC-------AAT------ 27006179 Query 307 GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 ||| ||||| ||||||||||| ||||||| |||||||||| || |||| || Sbjct 27006178 ---CCC---CTCCCAAAGTTACGGGGCTATTTTGCGGAGTTCCTTAGAAAGAGTTGTC 27006127 >seq1 Length=47851208 Score = 84.2 bits (92), Expect = 5e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 57 CCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 115 ||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||| || Sbjct 10423574 CCAGATCGTTACACCTTTCGTGTGGGTCGAAACTTACCCGACAAGGAATTTCGCTATCT 10423632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062397960192