Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq192 489 5e-136 seq6 260 4e-67 seq3 163 9e-38 seq4 114 4e-23 >seq192 Length=157790 Score = 489 bits (542), Expect = 5e-136 Identities = 409/497 (82%), Gaps = 3/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 103436 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 103495 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 103496 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 103555 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | ||||||| ||||||| ||||||||| Sbjct 103556 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 103613 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 103614 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 103673 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || | || |||| || || || || |||||||||||| || ||||||||||||| ||| Sbjct 103674 CACCGTTGAGTTTGGAACCCTGAGCAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 103733 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 103734 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 103793 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || ||| ||| || |||||||||||||| Sbjct 103794 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 103853 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 ||| |||||||||| ||| ||||||| ||||||||||||||||| | |||| ||| | Sbjct 103854 TAGGCTGCAACTCGCCTACATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 103913 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 103914 CGGTGAATTCGTTCCCG 103930 Score = 489 bits (542), Expect = 5e-136 Identities = 409/497 (82%), Gaps = 3/497 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 140151 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 140092 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 140091 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 140032 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | ||||||| ||||||| ||||||||| Sbjct 140031 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 139974 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 139973 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 139914 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || | || |||| || || || || |||||||||||| || ||||||||||||| ||| Sbjct 139913 CACCGTTGAGTTTGGAACCCTGAGCAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 139854 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 139853 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 139794 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || ||| ||| || |||||||||||||| Sbjct 139793 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 139734 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 ||| |||||||||| ||| ||||||| ||||||||||||||||| | |||| ||| | Sbjct 139733 TAGGCTGCAACTCGCCTACATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 139674 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 139673 CGGTGAATTCGTTCCCG 139657 >seq6 Length=30767194 Score = 260 bits (288), Expect = 4e-67 Identities = 256/329 (78%), Gaps = 1/329 (0%) Strand=Plus/Minus Query 168 TGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 ||| ||| ||||||||||| || || ||||||||||||||||||||| ||||||||||| Sbjct 13652476 TGGCTGTAGTCAGCTCGTGCTGTAAGGTGTTGGGTTAAGTCCCGCAACAAGCGCAACCCT 13652417 Query 228 TAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGA 287 | |||||||||| | || |||| || || || || ||||||| |||| || ||||| Sbjct 13652416 CGTGTTTAGTTGCCACCTTTGAGTTTGGAACCCTGAGCAGACTGCCCGTGATAAGCCGGA 13652357 Query 288 GGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTA 347 |||||||| ||| |||||||| |||| |||||| |||| | || |||||| ||||| Sbjct 13652356 GGAAGGTGAGGATGACGTCAAGTCATTGTGCCCCATATGCCCTAAGCGACACACATGCTA 13652297 Query 348 CAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTC 407 |||||| ||| |||||||| | || | |||||| ||| || ||| ||| || | Sbjct 13652296 CAATGGCCAAGACAAAGGGTTGTGATCCTGCGAGGGTGAGCTAACTCCACAAACCCGTCC 13652237 Query 408 TCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAG 467 |||||||| ||||||| |||||||||| ||| ||||| ||||||||||||||||| Sbjct 13652236 TCAGTTCGAATTGTAGGCTGCAACTCGCCTACATGAAATCGGAATCGCTAGTAATCGCCA 13652177 Query 468 ATCAG-CATGCTACGGTGAATACGTTCCC 495 |||| ||| |||||||| |||||| Sbjct 13652176 GTCAGCCATATGGCGGTGAATTTGTTCCC 13652148 Score = 188 bits (208), Expect = 2e-45 Identities = 184/236 (78%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 |||| || |||| | || ||||||||||||| | |||||||| || |||| |||||||| Sbjct 1760895 GACTACCAGTGATATACTGGAGGAAGGTGGGAATGACGTCAAGTCCGCATGACCCTTATG 1760836 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAA 386 ||||| ||||| |||||||||||| | ||||| ||| ||| | | | ||| | Sbjct 1760835 GGCTGGGCCACACATGTGCTACAATGGCAATTACAATGGGAAGCAAGGCTGTAAGGCGGA 1760776 Query 387 GCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGC 446 || ||||| || ||| ||||||||||||||| ||||||||||| | |||||| Sbjct 1760775 GCGAATCCGGAAAGATTGC-CTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGT 1760717 Query 447 TGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502 ||||||||||||||||||| ||||||||||| ||||||||| || |||| |||| Sbjct 1760716 TGGAATCGCTAGTAATCGTGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCT 1760661 Score = 185 bits (204), Expect = 3e-44 Identities = 182/233 (78%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 23 AAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGC 82 |||||||||||||||| || ||||||||||||||||||||||||||||| || ||| || Sbjct 4632181 AAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCATGTGGTTTAATTTGATACAAAGC 4632240 Query 83 GAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCCCCTTC 142 |||||||||||||| |||||||| | || ||||| || | ||||| | ||| Sbjct 4632241 GAAGAACCTTACCAGGACTTGACATGCCACGAATCCTCTTGAAAGAGAGGGAT--GCTTT 4632298 Query 143 GGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGT 202 | | || | ||||||| ||||||| ||||||| |||||| | | || |||| ||| Sbjct 4632299 CGAGAACGCTGACACAGGTGGTGCATGGCCGTCGTCAACTCGTGCCAT-AGGTGTTAGGT 4632357 Query 203 TAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGG 255 |||||| |||||||||||||||||| |||||||||| | || |||| || Sbjct 4632358 TAAGTCTCGCAACGAGCGCAACCCTCGTATTTAGTTGCCACCGTTGAGTTTGG 4632410 >seq3 Length=27368013 Score = 163 bits (180), Expect = 9e-38 Identities = 180/233 (77%), Gaps = 10/233 (4%) Strand=Plus/Minus Query 89 CCTTACCAAATCTTGACAT-CCTCTGACCCCTCTAGAGATAGAGGTTTCCCCTTCGGGGG 147 |||||||| |||||||| |||| || ||||| || | |||| | || ||| || Sbjct 15408819 CCTTACCAGGGCTTGACATGCCTC-GAATCCTCTTGAAAGAGAGCGGTGCC-TTCAGGA- 15408763 Query 148 ACAGAGTG---ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTA 204 || ||| ||||||| ||||||||||||||||| ||||| | | || |||||||| | Sbjct 15408762 --AG-GTGGACACAGGTGGTGCATGGTTGTCGTCAGTTCGTGCCATAAGGTGTTGGGTCA 15408706 Query 205 AGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAG 264 |||||||||||||| |||||||| |||||||||||| || |||| | || | || Sbjct 15408705 AGTCCCGCAACGAGGGCAACCCTCGTTTTTAGTTGCCATCGTTGAGTTTAGAACCATGAG 15408646 Query 265 TTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATG 317 |||||||||||| || ||| ||||||||| ||| |||||||| |||||||| Sbjct 15408645 CAGACTGCCGGTGATAAGCCGAAGGAAGGTGAGGATGACGTCAAGTCATCATG 15408593 >seq4 Length=25843236 Score = 114 bits (126), Expect = 4e-23 Identities = 77/86 (90%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 268 ACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGA 327 ||||||||||| || ||||||||||||| ||| |||||||| ||||||||||||||||| Sbjct 23827186 ACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGC 23827245 Query 328 TTTGGGCTACACACGTGCTACAATGG 353 ||||| |||||||||||||||||| Sbjct 23827246 CCTGGGCGACACACGTGCTACAATGG 23827271 Score = 95.1 bits (104), Expect = 4e-17 Identities = 76/91 (84%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 256 CACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCA 315 || ||| || |||||||||||| || ||||||||||||| ||| |||||||| |||||| Sbjct 7411810 CAGTCTCAGCAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCA 7411751 Query 316 TGCCCCTTATGATTTGGGCTACACACGTGCT 346 ||||||||||| ||||| ||||||||| Sbjct 7411750 TGCCCCTTATGCCCTGGGC--GACACGTGCT 7411722 Score = 89.7 bits (98), Expect = 2e-15 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| ||||||| ||||||||||| ||||||||||||||| ||| |||||| ||| Sbjct 23961116 ACAGGTGCTGCATGGCTGTCGTCAGCTAGTGTCGTGAGATGTTTGGTCAAGTCCTATAAC 23961057 Query 216 GAGCGCAACCCT 227 ||||| |||||| Sbjct 23961056 GAGCGAAACCCT 23961045 Score = 80.6 bits (88), Expect = 8e-13 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| |||||| |||||||||||||||||||||||||||| ||| ||||| ||| Sbjct 12004728 ACAGGTGTTGCATGATTGTCGTCAGCTCGTGTCGTGAGATGTTTGGTCGAGTCCTATAAC 12004787 Query 216 GAGCGCAACCCT 227 |||| ||| || Sbjct 12004788 GAGCAAAACTCT 12004799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503997112320