Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq192 178 3e-42 seq5 109 1e-21 seq7 96.9 7e-18 seq1 87.8 4e-15 seq4 78.8 2e-12 >seq192 Length=157790 Score = 178 bits (196), Expect = 3e-42 Identities = 179/230 (78%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 108749 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 108808 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | || ||| | || | | |||||||||||| ||||| Sbjct 108809 GTGCAAAGGTTTCCTCGGGCCAGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 108867 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||| Sbjct 108868 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 108927 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 108928 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 108977 Score = 178 bits (196), Expect = 3e-42 Identities = 179/230 (78%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 134838 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 134779 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | || ||| | || | | |||||||||||| ||||| Sbjct 134778 GTGCAAAGGTTTCCTCGGGCCAGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 134720 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||| Sbjct 134719 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 134660 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 134659 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 134610 >seq5 Length=18496696 Score = 109 bits (120), Expect = 1e-21 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||| || || ||| ||||| ||||||||| |||||| ||||||||||||||| Sbjct 10567149 GGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGT 10567090 Query 171 GCCCAAAGATACCCTCA-GCTTGGATGGAAACCATGC-GCACAGTGCAAAGGCAAAAGGG 228 | | ||| || |||| ||| ||| |||| | || | || || | ||| Sbjct 10567089 GTGCGAAGGTAGGCTCAAGCTAAGATT------ATGCTGTTGAGCGTAATGGTATAAGCC 10567036 Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288 || |||||| || ||| | || || ||| |||||||||||| | || ||||| || Sbjct 10567035 TGCCTGACTGTGAGACCTACTGGTATAACAGAGACGAAAGTCGGCCATAGTGATCAGGGA 10566976 Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || | | ||||| ||| ||||||||||||| |||| ||| | ||||||| Sbjct 10566975 GTCCCGTGTGGAAGGGCTCTCGCTCGACGGATCAAAGGTACGCCGGGGATA 10566925 >seq7 Length=22388614 Score = 96.9 bits (106), Expect = 7e-18 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169 ||||||| || || ||| ||||| ||||||||| |||||| ||||||||||||||| Sbjct 4450734 CGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGG 4450675 Query 170 CGCCCAAAGATACCCTCA-GCTTGGATGGAAACCATGC-GCACAGTGCAAAGGCAAAAGG 227 | | ||| || |||| ||| ||| ||| | || | || || | ||| Sbjct 4450674 TGTGCGAAGGTAGGCTCAAGCTAAGATTT------TGCTGTTGAGCGTAATGGTATAAGC 4450621 Query 228 GTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGC 287 || |||||| || ||| | ||| | ||| |||||||||| | | | |||||||| Sbjct 4450620 CTGCATGACTGTGAGACCTACTGGTCAAACAGAGACGAAAGTCAGCCACAGTGATCCGGG 4450561 Query 288 GGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || | | ||||| ||| ||||||||||||| |||| ||| | | ||||| Sbjct 4450560 AGTCCCGTGTGGAAGGGCTCTCGCTCGACGGATCAAAGGTACGCCGAGGATA 4450509 >seq1 Length=47851208 Score = 87.8 bits (96), Expect = 4e-15 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||| | | |||||||| | |||| | ||| |||||||||||||||| Sbjct 12817810 AGTGCAAAGGCAGAAGCGAGCTTGACTGCAAGACCCACCTGTCGAGCAGGGACGAAAGTC 12817751 Query 271 GGGCTTAATGATCCGGCGGTG 291 || |||| ||||||| ||||| Sbjct 12817750 GGCCTTAGTGATCCGACGGTG 12817730 >seq4 Length=25843236 Score = 78.8 bits (86), Expect = 2e-12 Identities = 61/73 (84%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||||| | |||||||| | ||| | ||| |||||||||||||||| Sbjct 9362256 AGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCTACCCGTCGAGCAGGGACGAAAGTC 9362197 Query 271 GGGCTTAATGATC 283 || |||| ||||| Sbjct 9362196 GGCCTTAGTGATC 9362184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982398113792