Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq192 230 5e-58 seq2 219 9e-55 seq7 203 7e-50 seq3 187 5e-45 seq4 98.7 2e-18 seq6 80.6 6e-13 >seq192 Length=157790 Score = 230 bits (254), Expect = 5e-58 Identities = 258/337 (77%), Gaps = 21/337 (6%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || || | ||| || |||||| | | |||||||||||| || ||||||||||||||| Sbjct 102999 TTCACGACCCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 102942 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 102941 TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 102882 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| |||||||||||||| |||||| ||| |||| |||||||||| ||| ||| |||||| Sbjct 102881 GTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCAC 102822 Query 182 CAACTAGCTAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||||||||| ||| | || | | || || ||| || ||| ||| Sbjct 102821 CAACTAGCTAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTT 102775 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | | | | | | || | ||||||||| |||||||| ||| | ||| || ||| Sbjct 102774 TTGCTCCTCAG-CCTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAA 102718 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 ||||| ||| || || ||||||||||||||||| || Sbjct 102717 GGGCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT 102681 Score = 230 bits (254), Expect = 5e-58 Identities = 258/337 (77%), Gaps = 21/337 (6%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || || | ||| || |||||| | | |||||||||||| || ||||||||||||||| Sbjct 140588 TTCACGACCCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 140645 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 140646 TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 140705 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| |||||||||||||| |||||| ||| |||| |||||||||| ||| ||| |||||| Sbjct 140706 GTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCAC 140765 Query 182 CAACTAGCTAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||||||||| ||| | || | | || || ||| || ||| ||| Sbjct 140766 CAACTAGCTAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTT 140812 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | | | | | | || | ||||||||| |||||||| ||| | ||| || ||| Sbjct 140813 TTGCTCCTCAG-CCTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAA 140869 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 ||||| ||| || || ||||||||||||||||| || Sbjct 140870 GGGCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT 140906 >seq2 Length=30405870 Score = 219 bits (242), Expect = 9e-55 Identities = 253/335 (76%), Gaps = 17/335 (5%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || || | ||| || |||||| | | |||||||||||| || ||||||||||||||| Sbjct 1937706 TTCACGACCCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 1937649 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||||||||||||||||| ||||||||||| |||||||||||| ||||| Sbjct 1937648 TTGCGGAAAATTCCCCACTGCTGCCTCCCATAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 1937589 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| ||||||||||||| |||||| ||| |||| |||||||||| ||| ||| |||||| Sbjct 1937588 GTGGCTGATCATCCTCTTGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCAC 1937529 Query 182 CAACTAGCTAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||||||||| ||| | || | | || || ||| || ||| ||| Sbjct 1937528 CAACTAGCTAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTT 1937482 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 | | | | | | || | ||||||||| |||||||| ||| | |||| | | Sbjct 1937481 TTGCTCCTCAG-CCTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCGCAAGG 1937423 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 |||| ||| || || ||||||||||||||||| || Sbjct 1937422 GCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT 1937388 >seq7 Length=22388614 Score = 203 bits (224), Expect = 7e-50 Identities = 179/220 (81%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 22305261 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 22305204 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| ||||| |||||| || |||||||||||| || Sbjct 22305203 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 22305144 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 22305143 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGAATCATTGGCTTGGTCAGCCTTTACCT 22305084 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218 |||||||| ||||| | || ||||| ||| | ||||| Sbjct 22305083 GACCAACTACCTAATACTACACAGGCTAATCGAACAGCGC 22305044 >seq3 Length=27368013 Score = 187 bits (206), Expect = 5e-45 Identities = 158/192 (82%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || || | ||| || |||||| | | ||||||||||| || | ||||||||||||| Sbjct 15800317 TTCACGACCCGTAGGCCTTCTACCTCT-ACGCGGCATTG-CTCTGTTAGGCTTTCGCCCA 15800260 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||||||||||||||||| ||||||||||| || ||||||||| || || Sbjct 15800259 TTGCGGAAAATTCCCCACTGCTGCCTCCCATAGGAGTCTGGGCCATGTCTCAGTCCCTGT 15800200 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| |||||||||||||| |||| | ||| |||| |||||||||| | | ||| |||||| Sbjct 15800199 GTGGCTGATCATCCTCTCGGACCTGCTACTGATCATCGCCTTGGTAAACTATTGCCTCAC 15800140 Query 182 CAACTAGCTAAT 193 |||||||||||| Sbjct 15800139 CAACTAGCTAAT 15800128 Score = 80.6 bits (88), Expect = 6e-13 Identities = 84/108 (78%), Gaps = 3/108 (3%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||| ||||| | | || ||||||| ||||||| | |||||||||| |||||| Sbjct 2678964 CACGCGACATTGCTTTG-TCGGGCTTTCTCCCATTGCGGAGAATTCCCCACTACTGCCTT 2678906 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 | |||||||| ||| | ||||||||||| | |||| ||||| |||| Sbjct 2678905 CAGTAGGAGTATGGGCTGTGTCTCAGTT--AATGTGGTTGATCTTCCT 2678860 >seq4 Length=25843236 Score = 98.7 bits (108), Expect = 2e-18 Identities = 60/64 (94%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACT 127 || |||||||||||||||||||||||||||||||| |||||||||||| |||||||| || Sbjct 23827562 AAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT 23827503 Query 128 GATC 131 |||| Sbjct 23827502 GATC 23827499 >seq6 Length=30767194 Score = 80.6 bits (88), Expect = 6e-13 Identities = 84/108 (78%), Gaps = 3/108 (3%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||||| |||||| || || ||||||| ||||||| || ||| ||||||||||||| Sbjct 16271004 CACGCAGCATTG-CTCTGTCGGGCTTTCTCCCATTGCGGAAAATTACCCACTGCTGCCTT 16270946 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 | |||||||| ||| |||||||||| |||||| ||||| |||| Sbjct 16270945 CGGTAGGAGTATGGGTTTTGTCTCAGTT--AGTGTGGTTGATCTTCCT 16270900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071997941760