Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq192 259 2e-66 seq7 224 4e-56 seq2 129 2e-27 >seq192 Length=157790 Score = 259 bits (286), Expect = 2e-66 Identities = 344/470 (73%), Gaps = 27/470 (6%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 107358 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 107299 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| || Sbjct 107298 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 107239 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314 | |||| |||||| |||| |||||||||||||| | ||||||| | | | | ||| Sbjct 107238 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 107179 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370 || | ||||||| |||||||||||||||||||| || || |||| Sbjct 107178 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 107126 Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429 || || ||| | | | |||| |||||||||||||| |||||||| |||| | Sbjct 107125 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA----GA 107072 Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489 || | ||| | |||| || | ||| || | ||||||| || ||||||||| Sbjct 107071 GCC--CAGGGCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 107019 Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549 |||||| ||||| ||||||||| ||||||||||||||| | | |||||||||||| | Sbjct 107018 TCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCA 106959 Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||||||||| ||| |||||||| | |||||||||| ||| || Sbjct 106958 GGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 106909 Score = 259 bits (286), Expect = 2e-66 Identities = 344/470 (73%), Gaps = 27/470 (6%) Strand=Plus/Plus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 136229 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 136288 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| || Sbjct 136289 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 136348 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314 | |||| |||||| |||| |||||||||||||| | ||||||| | | | | ||| Sbjct 136349 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 136408 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370 || | ||||||| |||||||||||||||||||| || || |||| Sbjct 136409 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 136461 Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429 || || ||| | | | |||| |||||||||||||| |||||||| |||| | Sbjct 136462 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA----GA 136515 Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489 || | ||| | |||| || | ||| || | ||||||| || ||||||||| Sbjct 136516 GCC--CAGGGCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 136568 Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549 |||||| ||||| ||||||||| ||||||||||||||| | | |||||||||||| | Sbjct 136569 TCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCA 136628 Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||||||||| ||| |||||||| | |||||||||| ||| || Sbjct 136629 GGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 136678 >seq7 Length=22388614 Score = 224 bits (248), Expect = 4e-56 Identities = 329/460 (72%), Gaps = 29/460 (6%) Strand=Plus/Plus Query 143 CCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTAT 202 ||| || |||||||||||||||||||||| | | ||| || |||| ||||||||||| Sbjct 5474712 CCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAA 5474771 Query 203 CCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACC 262 ||||| |||||| || | | |||||| | | | || |||| ||||| || | ||| Sbjct 5474772 CCACAACTCATCCGCTGATTCTTCAACATCAATCGGCTCGGACCTCCTTATAGTTTCACC 5474831 Query 263 CGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT-TGATC-GTGCCACTC 320 | |||||| |||| |||||||||||||| | ||||||||| | | | ||| || | Sbjct 5474832 CAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCTATAAGCAGTGACAAT- 5474890 Query 321 ATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACA 380 ||||||| ||||| |||||||||||||| || |||||| || || Sbjct 5474891 ---TGCCCTATGAAGACTCACTTTCGCTACGGCTCCC---------TTAACCAAGC--CA 5474936 Query 381 CAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGG 439 | | | | |||| |||||||||||||| | |||||| |||| | || | || Sbjct 5474937 CTGCCTATGAGTCGCCGGCTCATTCTTCAACAAGCACGCAGTCA---GAGGCC---AGGG 5474990 Query 440 CACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAG 499 | | |||| || | ||| || | ||||||| || ||||||||||||||| Sbjct 5474991 CTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGAAGA 5475045 Query 500 GGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTA 559 ||| ||||||| | ||||||||||||||| | | |||||||||||| ||||||||||| Sbjct 5475046 TGGTTCTTTTCAACCTTCCCTCACGGTACTACTTCACTATCGGTCACCTAGGAGTATTTA 5475105 Query 560 GGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 | ||| |||||||| | |||||||||| ||| || Sbjct 5475106 GCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 5475145 >seq2 Length=30405870 Score = 129 bits (142), Expect = 2e-27 Identities = 161/218 (74%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 139 TGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCC 198 || |||| || |||||||||||||||| ||||| | | ||| || |||| |||||||| Sbjct 16818250 TGTACCTCAACGCATTTCGGGGAGAACTAGCTAGCTCTGGGTTAGAGTGGCATTTCACCC 16818309 Query 199 CTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCT 258 ||| ||||| || ||| || | | ||||| | ||| ||||||| ||||||| || | Sbjct 16818310 CTAACCACAACTCGTCCGCTGATTCTTCAATATCAGTCGGTTCGGACCTCCACTTAGTTT 16818369 Query 259 TACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTGCC 316 |||| |||||| |||| |||||||||||||| | ||||||| | | | | || | Sbjct 16818370 CACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAATGAC 16818429 Query 317 ACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCT 354 | | | ||||| |||||||||||||||| ||| Sbjct 16818430 AAT----TGTCCTATGAAGACTCGCTTTCGCTACAGCT 16818463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817596510208