Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq192 271 2e-70 seq2 262 1e-67 seq3 210 5e-52 seq7 170 5e-40 seq4 100 7e-19 seq6 87.8 4e-15 >seq192 Length=157790 Score = 271 bits (300), Expect = 2e-70 Identities = 307/410 (75%), Gaps = 30/410 (7%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 102999 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 102940 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 102939 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 102880 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 102879 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 102820 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 102819 ACTAGCTAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGC 102771 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| |||||||||| ||| | ||||||| |||| Sbjct 102770 TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCA 102713 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 102712 GGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 102667 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || ||||||||||||||| ||||| Sbjct 102666 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 102620 Score = 271 bits (300), Expect = 2e-70 Identities = 307/410 (75%), Gaps = 30/410 (7%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 140588 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 140647 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 140648 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 140707 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 140708 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 140767 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 140768 ACTAGCTAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGC 140816 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| |||||||||| ||| | ||||||| |||| Sbjct 140817 TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCA 140874 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 140875 GGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 140920 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || ||||||||||||||| ||||| Sbjct 140921 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 140967 >seq2 Length=30405870 Score = 262 bits (290), Expect = 1e-67 Identities = 305/410 (74%), Gaps = 30/410 (7%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 1937706 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 1937647 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||| ||||||||||| |||||||||||| ||||||| Sbjct 1937646 GCGGAAAATTCCCCACTGCTGCCTCCCATAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 1937587 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 1937586 GGCTGATCATCCTCTTGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 1937527 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 1937526 ACTAGCTAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGC 1937478 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| |||||||||| ||| | |||||| |||| Sbjct 1937477 TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCGCAAGGGCA 1937420 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 1937419 GGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 1937374 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct 1937373 ---CCGTTCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 1937327 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 21 CTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCAC 80 ||||| | | |||||||||| ||| || ||||| | ||||||| | | ||| ||||| Sbjct 22778184 CTTCTACCTCCACGCGGCATTGCTCTGTCGGGCTTTCTCCCATTGAGGAGAATTTCCCAC 22778243 Query 81 TGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCT 137 | || ||| | ||||||| | | | ||||||||||| ||||||| || || |||| Sbjct 22778244 TACTCCCTTCGATAGGAGTATAGGCTGTGTCTCAGTT--AGTGTGGTTGATCTTCCT 22778298 >seq3 Length=27368013 Score = 210 bits (232), Expect = 5e-52 Identities = 293/410 (71%), Gaps = 32/410 (8%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | ||||||||| ||| | |||||| |||||||| Sbjct 15800317 TTCACGACCCGTAGGCCTTCTACCTCTACGCGGCATTGCTCTGTTAGGCTTTCGCCCATT 15800258 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||| ||||||||||| || ||||||||| || |||| Sbjct 15800257 GCGGAAAATTCCCCACTGCTGCCTCCCATAGGAGTCTGGGCCATGTCTCAGTCCCTGTGT 15800198 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| |||| |||| |||| |||||| ||| | ||| || | ||| Sbjct 15800197 GGCTGATCATCCTCTCGGACCTGCTACTGATCATCGCCTTGGTAAACTATTGCCTCACCA 15800138 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 |||||||||| | | | | ||| | | ||| | ||| |||| Sbjct 15800137 ACTAGCTAATTAGACGGGAGCCCCTCC--TCG-----GGC------GGATTCCTTTTTGC 15800091 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| ||||||||||| ||| | ||||||| |||| Sbjct 15800090 TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGTTGTTGTTCCCCTCCCAAGGGCA 15800033 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | || | | || ||||||||||||||||| ||| || || |||| Sbjct 15800032 GGTTTTTATGCGTTCCTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 15799987 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| | |||||||||| |||| ||||| Sbjct 15799986 ---CCGTCCGACTTGCATGTGTTAAGTATGCCGCCAGCATTCATCCTGAG 15799940 Score = 87.8 bits (96), Expect = 4e-15 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 21 CTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCAC 80 ||||| | | |||||| ||| ||| || ||||| | ||||||| | | ||||||||| Sbjct 2678974 CTTCTACCTCCACGCGACATTGCTTTGTCGGGCTTTCTCCCATTGCGGAGAATTCCCCAC 2678915 Query 81 TGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCT 137 | |||||| | |||||||| ||| | ||||||||||| | ||||| || || |||| Sbjct 2678914 TACTGCCTTCAGTAGGAGTATGGGCTGTGTCTCAGTT--AATGTGGTTGATCTTCCT 2678860 >seq7 Length=22388614 Score = 170 bits (188), Expect = 5e-40 Identities = 154/193 (80%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 |||||||| | | | | ||||||||| |||||| || |||| ||| ||||| ||||| Sbjct 22305261 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCC 22305202 Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121 ||||| ||| |||||||||||||||| ||||| |||||| || |||||||||||| |||| Sbjct 22305201 ATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAG 22305142 Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181 |||||||| |||||| |||||||||| | ||| | | || ||| ||| ||||| Sbjct 22305141 TGTGGCTGATCATCCGAAAAGACCAGCTAAGAATCATTGGCTTGGTCAGCCTTTACCTGA 22305082 Query 182 CCAACTAGCTAAT 194 ||||||| ||||| Sbjct 22305081 CCAACTACCTAAT 22305069 >seq4 Length=25843236 Score = 100 bits (110), Expect = 7e-19 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 63 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 122 ||| | || |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 23827568 TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 23827509 Query 123 GTGGCTGGTC 132 ||||||| || Sbjct 23827508 GTGGCTGATC 23827499 >seq6 Length=30767194 Score = 87.8 bits (96), Expect = 4e-15 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 21 CTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCAC 80 ||||| | | ||||| |||| ||| || ||||| | ||||||| | || ||| ||||| Sbjct 16271014 CTTCTACCTCCACGCAGCATTGCTCTGTCGGGCTTTCTCCCATTGCGGAAAATTACCCAC 16270955 Query 81 TGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCT 137 |||||||| | |||||||| ||| |||||||||| ||||||| || || |||| Sbjct 16270954 TGCTGCCTTCGGTAGGAGTATGGGTTTTGTCTCAGTT--AGTGTGGTTGATCTTCCT 16270900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222397652992