Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq192 333 8e-89 seq2 315 2e-83 seq3 269 8e-70 seq7 188 2e-45 seq4 91.5 4e-16 >seq192 Length=157790 Score = 333 bits (368), Expect = 8e-89 Identities = 281/343 (82%), Gaps = 3/343 (1%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 102802 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 102861 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 102862 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 102921 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 102922 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 102981 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||||| || ||| | | | ||||| |||||||||| || ||| Sbjct 102982 AGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAAT 103041 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| |||||||||||||||||||||| ||| || ||||||||||| Sbjct 103042 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCG 103101 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | | |||||||||| || |||||||| || ||||||| Sbjct 103102 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 103143 Score = 333 bits (368), Expect = 8e-89 Identities = 281/343 (82%), Gaps = 3/343 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 140785 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 140726 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 140725 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 140666 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 140665 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 140606 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||||| || ||| | | | ||||| |||||||||| || ||| Sbjct 140605 AGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAAT 140546 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| |||||||||||||||||||||| ||| || ||||||||||| Sbjct 140545 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCG 140486 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | | |||||||||| || |||||||| || ||||||| Sbjct 140485 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 140444 >seq2 Length=30405870 Score = 315 bits (348), Expect = 2e-83 Identities = 277/343 (81%), Gaps = 3/343 (1%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 1937509 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 1937568 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | ||||| ||||| |||||| ||| |||||||||||| ||| ||||||| ||||||||| Sbjct 1937569 CCAAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTATGGGAGGCAG 1937628 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 1937629 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 1937688 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||||| || ||| | | | ||||| |||||||||| || ||| Sbjct 1937689 AGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAAT 1937748 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| |||||||||||||||||||||| ||| || ||| ||||||| Sbjct 1937749 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCTTTATCCG 1937808 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||| | | |||||||||| || |||||||| || ||||||| Sbjct 1937809 AAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 1937850 Score = 75.2 bits (82), Expect = 3e-11 Identities = 88/118 (75%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| | ||||| | || Sbjct 6424367 CAGTGGGGAATTTTCCTCAATGGGCGAAAGCCTGACGGAGCAATGATGCGTGGAGGTAGA 6424308 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGA 395 |||||| || ||||| || ||| | | || ||||| |||||||||| || ||| Sbjct 6424307 AGGCCTACGAGTCGTGAACTTCTTTTCCCAGAGAAGAAGCAATGACGGTATCTGGGGA 6424250 >seq3 Length=27368013 Score = 269 bits (298), Expect = 8e-70 Identities = 268/342 (78%), Gaps = 5/342 (1%) Strand=Plus/Plus Query 162 CGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCT 221 ||||| |||||||||||||| ||| || | |||||||||||| |||||||||| | | Sbjct 15800122 CGTCTAATTAGCTAGTTGGTGAGGCAATAGTTTACCAAGGCGATGATCAGTAGCAGGTCC 15800181 Query 222 GAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCA 281 |||||| ||||| |||||| || ||||||||| || ||| ||||||| ||||||||||| Sbjct 15800182 GAGAGGATGATCAGCCACACAGGGACTGAGACATGGCCCAGACTCCTATGGGAGGCAGCA 15800241 Query 282 GTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGT-GAGCGATGAA 340 ||||||||| || | |||||||| ||||||| | ||||| ||||||| ||| | ||| Sbjct 15800242 GTGGGGAATTTTCCGCAATGGGCGAAAGCCTAACAGAGCAATGCCGCGTAGAG-GTAGAA 15800300 Query 341 GGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGA 398 ||||| |||||||| || ||| | | | ||||| ||||||| ||| || ||| | Sbjct 15800301 GGCCTACGGGTCGTGAACTTCTTTTCCCTGAGAAGAAGTAATGACAGTATCTGGGGAATA 15800360 Query 399 AGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGG 458 ||| | ||||||| ||| |||||||||||||||| ||| || |||||||||| | Sbjct 15800361 AGCATCTGCTAACTTTATGCTAGCAGCCGCGGTAATATAGAGGATGCAAGCGTTATCCAG 15800420 Query 459 AATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||| | | |||||||||| | |||||||| || ||||||| Sbjct 15800421 AATGA-TTGGGCGTAAAGCATCTGTAGGTGGCTTTTTAAGTC 15800461 Score = 82.4 bits (90), Expect = 2e-13 Identities = 80/102 (78%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 230 GATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAA 289 |||| ||||||| ||||||||||| | ||| |||||||| | |||||| ||||||||| Sbjct 2678865 GATCAACCACATT--AACTGAGACACAGCCCATACTCCTACTGAAGGCAGTAGTGGGGAA 2678922 Query 290 TATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTG 331 | | | ||||||| |||||| || ||||| | |||||| Sbjct 2678923 TTCTCCGCAATGGGAGAAAGCCCGACAAAGCAATGTCGCGTG 2678964 >seq7 Length=22388614 Score = 188 bits (208), Expect = 2e-45 Identities = 241/325 (74%), Gaps = 8/325 (2%) Strand=Plus/Plus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| |||||||| |||||| |||| |||||| | | ||| |||| | || || Sbjct 22305069 ATTAGGTAGTTGGTCAGGTAAAGGCTGACCAAGCCAATGATTCTTAGCTGGTCTTTTCGG 22305128 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||||| |||||| ||| |||||||||||| || ||||| ||||| ||||||||||||| Sbjct 22305129 ATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCCCACGGGGGGCAGCAGTGGGG 22305188 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC--T 345 ||| ||| ||||||||| |||||| ||| |||||| |||||||| || ||||| | | Sbjct 22305189 AATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAAT 22305248 Query 346 TCGGGTCGTAAAGCTCTGTCCTCAA--GGAAGATAATGACGGTACTTGAGGAGGAAGCCC 403 | | | |||||||||| | |||| | ||| |||| | ||| || || || ||| Sbjct 22305249 GCCGCTTGTAAAGCTCTTTTGTCAAGTGCGCGATCTTGACAGGACTCGATGAAAAAACCC 22305308 Query 404 CGGCT-AACTACGTGCCAGCAGCCGCGGTAA-TACGTAGGGGGCTAGCGTTATCCGGAAT 461 |||| |||| |||||| |||||| ||| ||| |||||| || ||| | ||| || Sbjct 22305309 AGGCTAAACTCCGTGCCCATCGCCGCGATAAGGACGGGGGGGGCAAGTGTTCTTCGG-AT 22305367 Query 462 TACTGGGGCGTAAAGGGTGCGTAGG 486 ||| || || ||||| |||||| Sbjct 22305368 GACTAGGTGGT-AAGGGGACGTAGG 22305391 >seq4 Length=25843236 Score = 91.5 bits (100), Expect = 4e-16 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 230 GATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAA 289 |||| |||||| ||| |||||||||||| ||| ||||||||||||||||||||||||||| Sbjct 23827499 GATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAA 23827558 Query 290 TATTGCACAA 299 | || | ||| Sbjct 23827559 TTTTCCGCAA 23827568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497597124608