Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq192 188 2e-45 seq7 161 3e-37 seq2 114 4e-23 seq6 80.6 9e-13 >seq192 Length=157790 Score = 188 bits (208), Expect = 2e-45 Identities = 397/583 (68%), Gaps = 38/583 (7%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 107157 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 107216 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 107217 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 107276 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 107277 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 107336 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 107337 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 107391 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 107392 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 107449 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | ||| | || | || |||||| ||||| | |||| | | | | Sbjct 107450 CCTCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 107509 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 107510 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 107567 Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456 || || | ||| ||||||| |||| ||| || | |||||||||| | || ||||| Sbjct 107568 GGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 107626 Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516 |||||||| |||||||| ||||| || ||| || || | |||| |||| | Sbjct 107627 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 107685 Query 517 CTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 || ||||||| ||||||| | | ||| |||||||||||||| Sbjct 107686 CTGCCGAAGCTGTGGGAT-GTAAAAATGCATCGGTAGGGGAGC 107727 Score = 188 bits (208), Expect = 2e-45 Identities = 397/583 (68%), Gaps = 38/583 (7%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 136430 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 136371 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 136370 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 136311 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 136310 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 136251 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 136250 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 136196 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 136195 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 136138 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | ||| | || | || |||||| ||||| | |||| | | | | Sbjct 136137 CCTCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 136078 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 136077 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 136020 Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456 || || | ||| ||||||| |||| ||| || | |||||||||| | || ||||| Sbjct 136019 GGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 135961 Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516 |||||||| |||||||| ||||| || ||| || || | |||| |||| | Sbjct 135960 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 135902 Query 517 CTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 || ||||||| ||||||| | | ||| |||||||||||||| Sbjct 135901 CTGCCGAAGCTGTGGGAT-GTAAAAATGCATCGGTAGGGGAGC 135860 >seq7 Length=22388614 Score = 161 bits (178), Expect = 3e-37 Identities = 386/575 (67%), Gaps = 44/575 (8%) Strand=Plus/Minus Query 13 AGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAA 72 ||||| | ||| ||| | |||||||||| | |||||||| ||||| |||||||||| Sbjct 5474896 AGGGCAATTGTCACTGCTTATAGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAA 5474837 Query 73 GGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGC 132 | | ||| | || |||||||||| || | | |||||||| ||| || ||||||| Sbjct 5474836 GCTTGGGTGAAACTATAAGGAGGTCCGAGCCGATTGATGTTGAAGAATCAGCGGATGAGT 5474777 Query 133 TGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTAT 192 ||||| ||||||||||| || | | ||| || |||||||||||| |||||| | Sbjct 5474776 TGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGT 5474717 Query 193 TTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTTATGGCTAGGGG 247 | ||| | || ||| | || |||| |||||| ||||||||| || | || Sbjct 5474716 TGAGGCATAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTTTCGG--TGCGG 5474664 Query 248 GTCATTGCGA----CTTACCAAACCATTGCAAACTCCGAATGC--------GCATCAGTT 295 | | |||| ||||||| || |||||||| |||| | | ||| Sbjct 5474663 GCC---GCGAGAACAGTACCAAATCAAGGCAAACTCTGAATACTAGATATAACCTCAAAA 5474607 Query 296 TTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAG 344 | || | || |||||| ||||| | |||| | | | ||||||| Sbjct 5474606 TAACAGGGGTCAAGGTCGGCTAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGA 5474547 Query 345 AAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCT 404 || | ||||| | ||||||||||||| ||||||| ||| ||| | | || || || Sbjct 5474546 AATAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTTAGTGATA--AAGGAGGTAG 5474489 Query 405 GATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAA 464 | ||| ||| ||| |||| ||| || | |||||| ||| | || ||||||||||||| Sbjct 5474488 GGGTGCAGAGAGAGCCAGGAGGTTTGCCTAGAAGCAACCA-CCCTTGAAAGAGTGCGTAA 5474430 Query 465 CAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAA 524 |||||||| ||||| || || || || | |||| |||| ||| ||||| Sbjct 5474429 TAGCTCACTGATCGAGCGCTCTTGCACCGAAGATGAACGGG-GCTAAGCGATCTGCCGAA 5474371 Query 525 GCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 || ||||||| | | ||| |||| || |||||| Sbjct 5474370 GCTGTGGGAT-GTAAAAATGCATCGATAAGGGAGC 5474337 >seq2 Length=30405870 Score = 114 bits (126), Expect = 4e-23 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||| | |||||||| ||||| ||||||||||| | ||| | || ||||| Sbjct 16818416 GACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAG 16818357 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 ||||||||| ||| || ||||| ||| || ||| ||| ||||| ||||||||||| || | Sbjct 16818356 GTCCGAACCGACTGATATTGAAGAATCAGCGGACGAGTTGTGGTTAGGGGTGAAATGCCA 16818297 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 | ||| || ||||| |||||| |||||| Sbjct 16818296 CTCTAACCCAGAGCTAGCTAGTTCTCCCCGAAA 16818264 >seq6 Length=30767194 Score = 80.6 bits (88), Expect = 9e-13 Identities = 106/145 (73%), Gaps = 3/145 (2%) Strand=Plus/Plus Query 336 CGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTA 395 ||||||| || | | ||| | ||||||||||||| ||||||| ||| ||| | | | Sbjct 30690773 CGAGAGGGAAACAGCCTGGATCACCAGCTAAGGCCCCTAAATGACCGCTTAGTGATA--A 30690830 Query 396 ACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAG 455 | || || | || |||||| |||| ||| || | |||||||||| | || |||| Sbjct 30690831 AGGAGGTAGGGGTGTAGAGACAGTCAGGAAGTTTGCCTAGAAGCAGCCA-CCCTTGAAAG 30690889 Query 456 AGTGCGTAACAGCTCACTAGTCGAG 480 |||| |||| |||||||| ||||| Sbjct 30690890 AGTGGGTAATAGCTCACTGATCGAG 30690914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689596755968