Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq192 129 1e-27 seq7 91.5 3e-16 >seq192 Length=157790 Score = 129 bits (142), Expect = 1e-27 Identities = 177/243 (73%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 106532 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGG 106591 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| || |||| ||| | Sbjct 106592 GAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTTAACC------TTTCGAA 106644 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||| ||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 106645 C--TGC-TGCTTAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 106701 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 106702 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 106761 Query 249 CCT 251 ||| Sbjct 106762 CCT 106764 Score = 129 bits (142), Expect = 1e-27 Identities = 177/243 (73%), Gaps = 11/243 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 137055 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGG 136996 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| || |||| ||| | Sbjct 136995 GAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTTAACC------TTTCGAA 136943 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||| ||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 136942 C--TGC-TGCTTAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 136886 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 136885 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 136826 Query 249 CCT 251 ||| Sbjct 136825 CCT 136823 >seq7 Length=22388614 Score = 91.5 bits (100), Expect = 3e-16 Identities = 169/242 (70%), Gaps = 12/242 (5%) Strand=Plus/Minus Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGG 70 |||||| ||| ||| || || || ||||| ||||||| ||| | ||| || Sbjct 5475520 GTGGATACCTAGGCACCTAGAGATGAGGAAGG-CGTAGTAAGCGACGAAATGCTTTCAGG 5475462 Query 71 AGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTC 130 ||| | ||| | | | |||||| ||||| ||||| || |||| ||| | | Sbjct 5475461 AGTT-GAAAATAAGCGTAGATCCGGAGATTCTCGAATAGGTTAACC------TTTCGAAC 5475409 Query 131 ATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTA 189 ||| |||| ||| ||| || | |||| || ||| ||| |||| |||||||| |||| Sbjct 5475408 --TGC-TGCTTAATCCATGGGCAGGCAAGAGACAACCTGGCAAACTAAAACATCTTAGTA 5475352 Query 190 GCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGC 249 || ||||||||||| ||| | |||||| ||||| |||||||||||||||| ||| Sbjct 5475351 GCCAGAGGAAAAGAAAGCAAAAGTAATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGC 5475292 Query 250 CT 251 || Sbjct 5475291 CT 5475290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918398236672