Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq192 567 8e-157 seq2 486 2e-132 seq1 118 1e-21 seq3 102 9e-17 seq6 82.4 8e-11 >seq192 Length=157790 Score = 567 bits (628), Expect = 8e-157 Identities = 707/966 (73%), Gaps = 2/966 (0%) Strand=Plus/Minus Query 159830 AACCGCCTCTATGTCGGTTGGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCAGCAACT 159889 ||||| || || | || ||||| || || |||||||||| ||| | ||| | |||||| Sbjct 1331 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1272 Query 159890 ATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGA 159948 |||| || || | || ||||| ||||| || || || || || ||||| || ||||| Sbjct 1271 -TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTGA 1213 Query 159949 ACCCGTCGCTGGTTCACTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 160008 ||| || |||| || | | || || ||||| || || |||||||| || |||| | Sbjct 1212 ACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1153 Query 160009 TTCCAACGCAATTGGTCTTCACTTCTATCCCATTTGGGAAGCCGCATCGCTCGACGAGTG 160068 || || || ||| | ||||| || || || |||||||| || || | || || || Sbjct 1152 CTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 1093 Query 160069 GCTCTATAACGGTGGTCCTTTCCAACTCGTAGTCTTCCACTTCCTGATCGGCATCTATGC 160128 | | || ||||||||||||| |||| | || | |||||| | | || | | Sbjct 1092 GTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 1033 Query 160129 CTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGT 160188 ||| |||||||||||||||||||| || |||||| |||||||| || ||||| ||| Sbjct 1032 CTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 973 Query 160189 TGCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCA 160248 |||||| || ||||| || || |||||| ||||||| ||| | | || || | ||||| Sbjct 972 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCA 913 Query 160249 GGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTTGT 160308 || || || || | |||||| || || ||||| |||||||| |||| ||| |||| Sbjct 912 AGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGT 853 Query 160309 ATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGT 160368 ||||||||| || ||||| ||||||||||| || || |||||| | || || ||||| || Sbjct 852 ATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 793 Query 160369 ATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAG 160428 |||||| || || || ||| |||||||||||| || |||| || |||||| | |||| Sbjct 792 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCTCTAGTTTGATCAG 733 Query 160429 AGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGAC 160488 || || ||||||| ||| || || | ||||||| ||||||||||||||||| || Sbjct 732 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 673 Query 160489 TTACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTT 160548 || || ||||| || || ||||| || || || || ||||||||||||||||| || Sbjct 672 CTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 613 Query 160549 TAACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTT 160608 ||||| || || ||| | || |||||||| |||||||||||||| || || |||||||| Sbjct 612 CAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTT 553 Query 160609 CACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTC 160668 || || | ||| | || ||||| ||||| | |||||||| || ||||| || || Sbjct 552 TACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATC 493 Query 160669 CATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGG 160728 | | || | || || | || | || |||||||| || | ||||||||||| Sbjct 492 TGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGCTAA 433 Query 160729 TCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCTCTCGACCTTGCTGC 160788 || || |||||||| ||||| || ||||| || || || |||||||| || || ||||| Sbjct 432 CCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTTCCCTCTAGATCTAGCTGC 373 Query 160789 TGCTGA 160794 || ||| Sbjct 372 TGTTGA 367 Score = 551 bits (610), Expect = 6e-152 Identities = 724/994 (73%), Gaps = 7/994 (1%) Strand=Plus/Plus Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604 || || ||||||||||| || |||||||| || | || ||||| ||| ||| | ||| Sbjct 34263 GACCGCTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 34322 Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664 | || |||||| | || || || || || | || ||||||||||||||| | || Sbjct 34323 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCA 34382 Query 161665 AGTTCCTATCTTGAGGG-TGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGC 161723 ||||||||| | || || || || || | | || || |||||| |||||| ||| | Sbjct 34383 AGTTCCTATTTGGAAGGCTGTAACTTCT-TAACCGCCGCAGTTTCCACTCCGGCTAATAG 34441 Query 161724 TATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGT 161782 | | | || ||| || || || || ||||||||||| || ||||| ||||| | | Sbjct 34442 TTTAGCGCACTCT-TTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTT 34500 Query 161783 GGATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTG 161842 || ||| | || || || |||| |||||| || || ||||| ||||||| || || | Sbjct 34501 GGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTACACGGCGCTTTCGGACTAATAG 34560 Query 161843 GATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCT 161901 | || ||| | ||||| |||||||||||||| ||| || | | || ||||| ||||| Sbjct 34561 GTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCA 34619 Query 161902 ATTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGA 161961 || || ||||| ||||| |||||||||||||| || || || || ||||| || || Sbjct 34620 ATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTAATTTATCCGCTAGGT 34679 Query 161962 CAGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTT 162021 ||||| ||||| || ||||| ||||| || || ||||| || | ||| | || Sbjct 34680 CAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTC 34739 Query 162022 TTCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGT 162081 || | ||||| || || |||||||| | || || || || |||||||| || || || Sbjct 34740 TTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTGGG 34799 Query 162082 ATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTAC 162141 | ||||| | |||| || | | |||||||| |||| || || ||||| || | | Sbjct 34800 GTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATTT 34859 Query 162142 CAAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACT 162201 |||||||||| |||||||| ||| |||||| || | || |||| || || ||| Sbjct 34860 GAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACT 34919 Query 162202 TACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAAT 162261 || || ||||| || || ||||| || ||||| || ||||| || |||||||| ||| Sbjct 34920 TATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAAT 34979 Query 162262 AAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCT 162321 || |||||||| |||||||||||| | || || || || | ||| | |||| ||| || Sbjct 34980 AAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTGTGGATGAGTGCT 35039 Query 162322 ATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATT 162381 | || | | || || || ||||| || ||||| || ||||| || |||||||| || Sbjct 35040 CTTGGAGTAGTCGGTCTGGCCCTTAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATC 35099 Query 162382 CGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAA 162441 ||||||||||| |||||||||||||| || ||||||||||| ||||| ||||| || ||| Sbjct 35100 CGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAA 35159 Query 162442 GGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAG 162501 ||| ||||||| ||| |||| | ||||| || ||||| ||| || ||||||||||| Sbjct 35160 GGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAG 35219 Query 162502 GAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 || ||||| || | || ||||| || | ||||| Sbjct 35220 GAGGTTCTACCCCGTGGAAACGCTCT-TTAATGG 35252 >seq2 Length=30405870 Score = 486 bits (538), Expect = 2e-132 Identities = 681/952 (72%), Gaps = 4/952 (0%) Strand=Plus/Plus Query 159845 GGTTGGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCAGCAACTATCTG--CTTCATCG 159902 || ||||| || || |||||||||| ||| | ||| | ||||| |||| ||| || Sbjct 16144613 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCACAACT-TCTGTACTT-ATTA 16144670 Query 159903 TCGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTT 159962 | | ||||| ||||| || || || || || ||||| || ||| |||| || |||| | Sbjct 16144671 TTACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGAT 16144730 Query 159963 CACTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTG 160022 | | | || || ||||| || || |||||||| || |||| | || || || | Sbjct 16144731 CTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAG 16144790 Query 160023 GTCTTCACTTCTATCCCATTTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTG 160082 || | ||||| || || || |||||||| || || | || || ||| | || ||||||| Sbjct 16144791 GTATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTG 16144850 Query 160083 GTCCTTTCCAACTCGTAGTCTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTG 160142 |||||| |||| | || | |||||| | || | | ||| |||||||||| Sbjct 16144851 GTCCTTATGAACTAATTGTTCTACACTTCTCACTTGGTGTAGCTTGCTACATGGGTCGTG 16144910 Query 160143 AGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTC 160202 ||||||| | || |||||| |||| ||| || ||||| ||||||||| || |||| Sbjct 16144911 AGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCTC 16144970 Query 160203 CAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCG 160262 | || || |||||| ||||||| ||| | | || || | ||||| || || || | Sbjct 16144971 CTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTG 16145030 Query 160263 ATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAAC 160322 | | ||| | || || ||||| |||||||| |||| ||| ||||||||||||| | | Sbjct 16145031 ACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGC 16145090 Query 160323 ACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTC 160382 |||| ||||||||||| || || |||||| | || | || || |||||||| || || | Sbjct 16145091 ACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCC 16145150 Query 160383 TGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAA 160442 | ||| |||||||||||| || |||| || ||||| | |||| || || | | ||| Sbjct 16145151 TATTCAGTGCTATGCATGGGTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAAA 16145210 Query 160443 CTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCG 160502 ||| || || | ||||||| ||||||||||||||||| || || || ||| | | Sbjct 16145211 ATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAG 16145270 Query 160503 CAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCT 160562 | || ||||| || || || || ||||||||||||||||| || ||||| || | | Sbjct 16145271 CCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGTT 16145330 Query 160563 CTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTG 160622 || | || |||||||| |||||||||||||| || || |||||||| || | | ||| Sbjct 16145331 CTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGTA 16145390 Query 160623 TTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACC 160682 | ||| ||||| ||||| | |||||||| || ||||| || || | | || | | Sbjct 16145391 TCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTC 16145450 Query 160683 AAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAG 160742 | || | || | || |||||||| || | ||||||||| | || || ||||||| Sbjct 16145451 AGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAG 16145510 Query 160743 TCATGCACGAGCGTAACGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 160794 | ||||| || ||||| ||||| || |||||||| || || ||||||| ||| Sbjct 16145511 TTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq1 Length=47851208 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 160959 GGATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTG 161018 ||||||| || | ||||||||||| || || || ||| | ||| ||||||||| || Sbjct 46743421 GGATGATGTTTACATTCTTGACGCTGCGGAGGAGGCCGGTATCGACCTACCCTACTCTTG 46743480 Query 161019 TCGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATC 161078 | |||||| |||||||| | |||||||| || ||| | || |||||| || || Sbjct 46743481 CAGGGCTGGTTCTTGCTCTTCATGTGCTGGCAAAGTTGTGGAAGGGGGTGTAGACCAGTC 46743540 Query 161079 TGATCAATCTTTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGC 161138 ||||| ||||| |||||||| || |||| ||||||||||| || || || || Sbjct 46743541 AGATCAGAGCTTCCTTGATGATGAACAGATTGATGGTGGATTTGTCCTTACTTGTGTGGC 46743600 Query 161139 TTATCCCACTTCTGATGT 161156 |||||| | |||||||| Sbjct 46743601 TTATCCTTCATCTGATGT 46743618 >seq3 Length=27368013 Score = 102 bits (112), Expect = 9e-17 Identities = 101/129 (78%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 162384 TGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGG 162443 ||||| ||| |||||||||||| |||| || |||||||| ||||| |||| || ||||| Sbjct 18684802 TGCAGTGGAAGATCCTGAATTTTAAACTTTTTACACCAAAAATATTATCTTAAACGAAGG 18684861 Query 162444 TCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGA 162503 | ||||||| | | ||| | | ||||| || ||| | ||| || ||||||||||||| Sbjct 18684862 TATTCGTGC-TTGACGGCTCAA---GATCAGCCTCATAAAAACCTTATATTCCCTGAGGA 18684917 Query 162504 AGTTCTGCC 162512 ||||| || Sbjct 18684918 GGTTCTTCC 18684926 >seq6 Length=30767194 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 160460 GGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTC 160519 ||||||| ||||||||||||||||| || || || || || || || ||||| || || Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 160520 GGTCGTTTGATCTTCCAATATGC 160542 || || ||||||||||||||||| Sbjct 12498377 GGCCGATTGATCTTCCAATATGC 12498355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551374676697600