Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq192 675 0.0 seq2 580 1e-160 seq6 93.3 5e-14 >seq192 Length=157790 Score = 675 bits (748), Expect = 0.0 Identities = 733/967 (76%), Gaps = 4/967 (0%) Strand=Plus/Minus Query 160599 AATCGTCTTTACGTCGGTTGGTTCGGTGTGCTGATGATCCCAACTCTGTTGGCAGCAACC 160658 || ||||||||| | || ||||| ||||| |||||||||| ||| | ||| | ||||| Sbjct 1331 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1272 Query 160659 GTCTGC-TTTATTACTGCGTTCGTTGCTGCTCCCCCCGTGGACATCGACGGTATCCGTGA 160717 |||| ||||||| ||| ||| ||||||| || || || || || || ||||| ||||| Sbjct 1271 -TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTGA 1213 Query 160718 ACCCGTTGCTGGTTCACTGATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTC 160777 ||| ||| |||| || | | ||||||||||| || || |||||||| || ||||| | Sbjct 1212 ACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1153 Query 160778 TTCCAACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCTGCATCTCTTGATGAATG 160837 || || || ||| | ||||| ||||| || |||||||| || || |||||||||| Sbjct 1152 CTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 1093 Query 160838 GCTCTACAATGGTGGTCCTTACCAACTGGTCGTATTTCACTTCCTGATCGGCATCTTCTG 160897 | | ||||| ||||||||||| |||| | || | |||||| | | || | || Sbjct 1092 GTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 1033 Query 160898 CTACATGGGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCATGCGCCCCTGGATCTGC-G 160956 |||||||||||| |||||||||||| | ||| || || |||||||| ||||| ||| | Sbjct 1032 CTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TGCTG 974 Query 160957 TTGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTC 161016 |||||||||| || |||||||| ||||| | ||| || ||| | | ||||| | |||| Sbjct 973 TTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTC 914 Query 161017 AAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTACCTTCAACTTCATGCTTG 161076 |||| || ||||| ||||||||||| || ||||| ||||| |||||||||||| ||| Sbjct 913 AAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTG 854 Query 161077 TCTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGGTG 161136 | ||||| || || ||||||||||| |||||||| || |||||||| || || ||||||| Sbjct 853 TATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTG 794 Query 161137 TCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGGTTACTTCTTCCCTGGTTC 161196 | ||||| || || || ||| || |||||||| || |||| || ||| || | Sbjct 793 TATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCTCTAGTTTGATCA 734 Query 161197 GTGAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGA 161256 | |||||||| || || || || || | ||||||| || |||||||| ||||| | Sbjct 733 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 674 Query 161257 CCTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCT 161316 |||| || ||||| || ||||||||||| || || || ||||||||||||| ||| | Sbjct 673 CCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 614 Query 161317 TCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGT 161376 ||||||| || ||||| || || |||||||| || || |||||||| || |||||||||| Sbjct 613 TCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGT 554 Query 161377 TCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACGGATTCAACTTCAACCAGT 161436 | || || | ||| || ||| ||||| |||||| | || || || || ||||| || | Sbjct 553 TTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAAT 494 Query 161437 CCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTGACGTTCTGAATCGTGCTA 161496 | | | ||| ||||||| || | || || |||||||| || | || || |||| Sbjct 493 CTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGCTA 434 Query 161497 ACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTCGCTG 161556 |||||||||||||||| ||||| || |||||||| || || |||||||| ||||| |||| Sbjct 433 ACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTTCCCTCTAGATCTAGCTG 374 Query 161557 CTGCTGA 161563 ||| ||| Sbjct 373 CTGTTGA 367 Score = 533 bits (590), Expect = 2e-146 Identities = 715/991 (72%), Gaps = 8/991 (1%) Strand=Plus/Plus Query 163917 GATCGCTTTGTCTTTGTGGGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTTGCA 163976 || ||||| || ||||| ||||||||||| || | || ||||| ||| ||| | || Sbjct 34263 GACCGCTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 34322 Query 163977 ATTGGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTTGGTACACCCACGGTCTCGCG 164036 | || || ||| | || |||||||| ||||| || ||||| ||||| || | || Sbjct 34323 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCA 34382 Query 164037 TCTAGTTACC--TTG--AGGGTGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGA 164092 |||| | ||| ||| || ||| ||| | || || || || || || || ||| | Sbjct 34383 ---AGTTCCTATTTGGAAGGCTG-TAACTTCTTAACCGCCGCAGTTTCCACTCCGGCTAA 34438 Query 164093 TGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGACTTCATTAG 164152 | | | | || ||| | | |||| ||||||||||| | || || || || | | | Sbjct 34439 TAGTTTAGCGCACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCG 34498 Query 164153 GTGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGAT 164212 ||||| ||| | || || || ||| ||||||| || | ||||| |||||| || || Sbjct 34499 TTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTACACGGCGCTTTCGGACTAAT 34558 Query 164213 CGGTTTCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGC 164272 ||||| ||| | || || |||||| |||| || ||| | || || || ||||| Sbjct 34559 AGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGC 34618 Query 164273 TATTGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGG 164332 || || ||||| ||||| |||||||| ||||| || ||||| || || || || || Sbjct 34619 AATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTAATTTATCCGCTAGG 34678 Query 164333 GCAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCTT 164392 || ||| ||||||| ||||| ||| ||||| || || || || || ||||| || | Sbjct 34679 TCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCT 34738 Query 164393 GTTCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGG 164452 || ||||||| || ||||| |||||| | ||||| || ||||||||||| ||||| || Sbjct 34739 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTGG 34798 Query 164453 CATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTT 164512 | | || | |||||| | || ||||||||||||||||||||||| |||||||| || Sbjct 34799 GGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATT 34858 Query 164513 TGAAGATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGAC 164572 |||||||||||| ||||||| ||| || || | || ||||||| ||||| || Sbjct 34859 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAAC 34918 Query 164573 TTACTCGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 164632 ||| || |||||||| || |||||||| ||||| || || ||||| ||||||| ||| Sbjct 34919 TTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAA 34978 Query 164633 TAAGCGTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 164692 ||| |||||||| || ||||||||| | ||||| || || | || | |||| ||| | Sbjct 34979 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTGTGGATGAGTGC 35038 Query 164693 TATTGGTATCATCGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 164752 | |||| | ||||||| || || || || ||||| ||||| || || |||||||| || Sbjct 35039 TCTTGGAGTAGTCGGTCTGGCCCTTAACCTACGTGCCTATGACTTCGTTTCTCAGGAAAT 35098 Query 164753 TAGAGCAGCAGAGGATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGA 164812 | ||||| || ||||||||||||||||| ||||| || || || || ||| | || || Sbjct 35099 CCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGA 35158 Query 164813 AGGACTCCGTGCCTGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGA 164872 ||| | ||||| |||||||| | ||| ||||| || ||| || |||| || || Sbjct 35159 AGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 35218 Query 164873 GGAAGTTCTTCCGAGAGGTAACGCACTCTAA 164903 ||| ||||| || | || ||||| || ||| Sbjct 35219 GGAGGTTCTACCCCGTGGAAACGCTCTTTAA 35249 >seq2 Length=30405870 Score = 580 bits (642), Expect = 1e-160 Identities = 712/965 (74%), Gaps = 8/965 (1%) Strand=Plus/Plus Query 160603 GTCTTTACGTCGGTTGGTTCGGTGTGCTGATGATCCCAACTCTGTTGGCAGCAACCGTCT 160662 |||||||| | || ||||| ||||| |||||||||| ||| | ||| | |||| ||| Sbjct 16144602 GTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCACAACT-TCT 16144660 Query 160663 GCT-TTATTACTGCGTTCGTTGCTGCTCCCCCCGTGGACATCGACGGTATCCGTGAACCC 160721 | |||||| | | ||| ||||||| || || || || || || ||||| ||| |||| Sbjct 16144661 GTACTTATTATTACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCT 16144720 Query 160722 GTTGCTGGTTCACTGATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCC 160781 ||| |||| || | | ||||||||||| || || |||||||| || ||||| | || Sbjct 16144721 GTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCT 16144780 Query 160782 AACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCTGCATCTCTTGATGAATGGCTC 160841 || || ||| | ||||| ||||| || |||||||| || || ||||||||||| | Sbjct 16144781 GCAGCTATAGGTATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTA 16144840 Query 160842 TACAATGGTGGTCCTTACCAACTGGTCGTATTTCACTTCCTGATCGGCATCTTCTGCTAC 160901 ||||| ||||||||||| |||| | || | |||||| | || | |||||| Sbjct 16144841 TACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTCACTTGGTGTAGCTTGCTAC 16144900 Query 160902 ATGGGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCATGCGCCCCTGGATCTGC-GTTGC 160960 |||||||| |||||||| || | ||| || || | |||||| ||||| ||| ||||| Sbjct 16144901 ATGGGTCGTGAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGAT-TGCTGTTGC 16144959 Query 160961 ATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGG 161020 |||||| || |||||||| ||||| | ||| || ||| | | ||||| | |||||||| Sbjct 16144960 ATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGG 16145019 Query 161021 TTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTACCTTCAACTTCATGCTTGTCTT 161080 || ||||| | ||| |||| || ||||| ||||| |||||||||||| |||| || Sbjct 16145020 AAGCTTTTCTGACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATT 16145079 Query 161081 CCAGGCAGAACACAACATCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGGTGTCTT 161140 ||| || | ||||||||||| |||||||| || |||||||| || | || ||||| || Sbjct 16145080 CCAAGCTAAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATT 16145139 Query 161141 CGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGGTTACTTCTTCCCTGGTTCGTGA 161200 ||| || || || ||| || |||||||| || |||| || || || | | || Sbjct 16145140 CGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCCCTAGTTTGATCAGGGA 16145199 Query 161201 AACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTA 161260 ||||| | || || || || | ||||||| || |||||||| ||||| ||||| Sbjct 16145200 AACCATAAAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTA 16145259 Query 161261 CAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAA 161320 || ||| | || ||||||||||| || || || ||||||||||||| ||| ||||| Sbjct 16145260 TAATATCATAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAA 16145319 Query 161321 CAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCAC 161380 ||| || |||| || || |||||||| || || |||||||| || ||||||||||| || Sbjct 16145320 CAATTCTTGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTAC 16145379 Query 161381 TGCACTT--GGTGTCTCCACCATGGCATTCAACCTGAACGGATTCAACTTCAACCAGTCC 161438 ||||| ||| || || ||||| |||||| | || || || || ||||| || || Sbjct 16145380 --CACTTTAGGTATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCT 16145437 Query 161439 ATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTGACGTTCTGAATCGTGCTAAC 161498 | | ||| ||||||| || | || || |||||||| || | || || | |||| Sbjct 16145438 GTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTTAAC 16145497 Query 161499 CTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTCGCTGCT 161558 |||||||||||||| ||||| || ||||||||||| || |||||||| ||||| |||||| Sbjct 16145498 CTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCT 16145557 Query 161559 GCTGA 161563 | ||| Sbjct 16145558 GTTGA 16145562 >seq6 Length=30767194 Score = 93.3 bits (102), Expect = 5e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 161408 CAACCTGAACGGATTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAA 161467 ||| || || || || || ||||| || || | | ||| ||||||| || | || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 161468 CACCTGGGCTGACGTTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAA 161527 || |||||||| || | || | ||||||||||||||||| || ||||| || ||||| Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 161528 TGCTCACAACTTCCCTCTGGATCTCGCTGCTGCTGA 161563 |||||| || |||| ||| ||| | ||| ||| ||| Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559326657612800