Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq2229 87.8 2e-12 >seq2229 Length=2552774 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 162745 CGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAG 162804 || ||||||||| |||| ||||| || ||||| |||||||||||||| ||||| ||| Sbjct 51155 CGGGACTGGGGATTCGCCGGGGACTATGTGGAGGCCATGTGGTTGATGCTCCAGCAGGAG 51096 Query 162805 AAGCCAGATGATTATGTGATCGCAACTG 162832 || || || ||||||||| | ||||||| Sbjct 51095 AAACCCGACGATTATGTGGTGGCAACTG 51068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691308764407800