Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq160 77.0 3e-12 seq462 75.2 1e-11 >seq160 Length=728484 Score = 77.0 bits (84), Expect = 3e-12 Identities = 82/103 (80%), Gaps = 8/103 (8%) Strand=Plus/Minus Query 86 ACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGG--GTCCCTACCCAGAAATGGGAGG 143 |||| | |||||| ||| |||||||||||| || || |||||| | | || |||| | Sbjct 401156 ACTAAGAAAACTGCCCC-GTAACTTCGGGAGAAGGGGTGTCCCTTC---GCAAAGGGA-G 401102 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAA-CACAG 185 ||||| |||||||||| | |||||||||| |||||| ||||| Sbjct 401101 TCGCAGTGAATAGGTCCGGTCAACTGTTTACCAAAAAGCACAG 401059 >seq462 Length=363964 Score = 75.2 bits (82), Expect = 1e-11 Identities = 64/79 (81%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 45 GTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCCTG 104 || || ||||||| | |||||||| ||| || | | ||||| | |||||| || ||||| Sbjct 240058 GTAGAGTATACTAGGACGCTTGAGAGAACCATGTTGAAGGACTTCGGCAAAATGGCCCTG 240117 Query 105 TAACTTCGGGATAAAGGGT 123 ||||||||||| ||||||| Sbjct 240118 TAACTTCGGGAGAAAGGGT 240136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531188771428