Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1100 122 2e-25 seq141 120 8e-25 seq165 91.5 4e-16 seq25 89.7 1e-15 seq1008 87.8 5e-15 seq294 87.8 5e-15 >seq1100 Length=112111 Score = 122 bits (134), Expect = 2e-25 Identities = 165/228 (72%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| || |||||||||| |||||||| |||||||| ||||||| | ||||||||| Sbjct 31741 ATCGTTACACCTTTCGTGCAGGACGGAACTTCCCCGACAAAGAATTTCACAACCTTAGGA 31682 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT---TCG-CGTTAGC 182 ||||||| ||||||| |||| || || || |||||| | ||| ||| | | | Sbjct 31681 CCGTTATAGTTACGGTCGCCATTCACGGGAGCTTCGGTTGCCGGCTCCCTCGTCTTCAAG 31622 Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC 242 | ||| | || |||||||||||| | ||| | |||| || |||| | ||| | Sbjct 31621 TCACCAACTTCCTTGACCTTCCGGCACTGAGCAAGTGTCAGCTCCCATACATGGTCTTGC 31562 Query 243 GTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290 | ||||||||| |||| | ||| |||| | | | | ||| |||| Sbjct 31561 GACTTTGCAGAGATCTGTATATTTTGTAAATAATTGTCGGGGCATGGT 31514 >seq141 Length=802350 Score = 120 bits (132), Expect = 8e-25 Identities = 110/139 (79%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 27 ATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCA 86 || || ||||||| ||| ||| | ||||||| ||| |||||||| | |||||| | Sbjct 800121 ATGTCTATTTCACCGAGCCTCTTTTCGAGACAGTGCCTAGATCGTTACTTCTTTCGTGTA 800180 Query 87 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCC 146 ||| |||||||| ||| |||| |||||| |||||||||||| ||||| |||| ||| ||| Sbjct 800181 GGTTGGAACTTATCCGTCAAGAAATTTCACTACCTTAGGACTGTTATAGTTATGGCTGCC 800240 Query 147 GTTTACCGGGGCTTCGATC 165 || ||| |||||||| || Sbjct 800241 ATTCACCAGGGCTTCGGTC 800259 >seq165 Length=715179 Score = 91.5 bits (100), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| | || ||| |||||||||||| |||||||||||||| |||||||||||| Sbjct 395921 ATCGTTACACGTTTAATGCGGGTCGGAACTTAGCCGACAAGGAATTT-GCTACCTTAGGA 395863 Query 127 CCGTTATTGTTA 138 |||||||||||| Sbjct 395862 CCGTTATTGTTA 395851 Score = 86.0 bits (94), Expect = 2e-14 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| || || ||| ||||||||||||||| ||||||||||| ||||||||| || Sbjct 435117 ATCGTTACACCTTTAATGCGGGTCGGAACTTACCCAACAAGGAATTTTGCTACCTTATGA 435058 Query 127 CCGTTATTGTTA 138 || ||| ||||| Sbjct 435057 CCATTACTGTTA 435046 >seq25 Length=1429342 Score = 89.7 bits (98), Expect = 1e-15 Identities = 78/96 (81%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||| |||||| | ||| ||| ||||||| || ||||| |||||||||||||||||| Sbjct 751799 ATCATTACGCGTGTTGTGTGGGTTAGAACTTAACCAACAAGAAATTTCGCTACCTTAGGA 751740 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG 162 ||||||| ||||| | |||| || |||| ||||||| Sbjct 751739 CCGTTATAGTTACTGTCGCC-TTCACCGAGGCTTCG 751705 >seq1008 Length=138720 Score = 87.8 bits (96), Expect = 5e-15 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 197 AACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTG 256 |||||||| ||||| |||||| |||| || |||||| || || | || ||||||| Sbjct 45639 AACCTTCCAGCACCAGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTC 45580 Query 257 CTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTAT 292 ||||||||||||||||||||||| | |||||||| Sbjct 45579 CTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTAT 45544 >seq294 Length=511472 Score = 87.8 bits (96), Expect = 5e-15 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 197 AACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTG 256 |||||||| ||||| |||||| |||| || |||||| || || | || ||||||| Sbjct 434655 AACCTTCCAGCACCAGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTC 434714 Query 257 CTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTAT 292 ||||||||||||||||||||||| | |||||||| Sbjct 434715 CTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTAT 434750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260772489344